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mrds  

Mark-Recapture Distance Sampling
View on CRAN: Click here


Download and install mrds package within the R console
Install from CRAN:
install.packages("mrds")

Install from Github:
library("remotes")
install_github("cran/mrds")

Install by package version:
library("remotes")
install_version("mrds", "3.0.0")



Attach the package and use:
library("mrds")
Maintained by
Laura Marshall
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2012-03-27
Latest Update: 2023-07-06
Description:
Animal abundance estimation via conventional, multiple covariate and mark-recapture distance sampling (CDS/MCDS/MRDS). Detection function fitting is performed via maximum likelihood. Also included are diagnostics and plotting for fitted detection functions. Abundance estimation is via a Horvitz-Thompson-like estimator.
How to cite:
Laura Marshall (2012). mrds: Mark-Recapture Distance Sampling. R package version 3.0.0, https://cran.r-project.org/web/packages/mrds. Accessed 22 Dec. 2024.
Previous versions and publish date:
2.0.5 (2012-03-27 20:02), 2.0.9 (2012-12-04 20:52), 2.1.0 (2012-12-11 07:55), 2.1.2 (2013-06-26 07:40), 2.1.3 (2013-08-13 17:06), 2.1.4 (2013-09-23 07:55), 2.1.5 (2014-04-22 18:59), 2.1.6 (2014-06-11 01:51), 2.1.8 (2014-09-16 02:13), 2.1.10 (2014-09-27 16:50), 2.1.12 (2015-02-05 00:46), 2.1.14 (2015-07-29 18:11), 2.1.16 (2016-08-10 20:21), 2.1.17 (2016-10-03 22:59), 2.1.18 (2017-07-04 08:30), 2.2.0 (2018-06-27 15:49), 2.2.1 (2020-01-22 17:20), 2.2.2 (2020-05-12 12:20), 2.2.3 (2020-07-31 15:20), 2.2.4 (2020-12-01 09:40), 2.2.5 (2021-07-01 09:10), 2.2.6 (2022-03-17 14:40), 2.2.7 (2022-08-21 02:00), 2.2.8 (2022-11-16 16:40), 2.2.9 (2023-07-06 13:30), 2.3.0 (2023-12-18 09:50)
Other packages that cited mrds R package
View mrds citation profile
Other R packages that mrds depends, imports, suggests or enhances
Complete documentation for mrds
Functions, R codes and Examples using the mrds R package
Some associated functions: AIC.ddf . DeltaMethod . NCovered . add.df.covar.line . adj.check.order . apex.gamma . assign.default.values . assign.par . average.line.cond . average.line . book.tee.data . calc.se.Np . cdf.ds . cds . check.bounds . check.mono . coef.ds . compute.Nht . covered.region.dht . create.bins . create.command.file . create.ddfobj . create.model.frame . create.varstructure . ddf.ds . ddf.gof . ddf.io.fi . ddf.io . ddf . ddf.rem.fi . ddf.rem . ddf.trial.fi . ddf.trial . det.tables . detfct.fit . detfct.fit.opt . dht.deriv . dht . dht.se . distpdf . ds.function . flnl . flt.var . g0 . getpar . gof.ds . gstdint . histline . integratedetfct.logistic . integratelogistic.analytic . integratepdf . io.glm . is.linear.logistic . is.logistic.constant . keyfct.th1 . keyfct.th2 . keyfct.tpn . lfbcvi . lfgcwa . logLik.ddf . logisticbyx . logisticbyz . logisticdetfct . logisticdupbyx . logisticdupbyx_fast . logit . mcds . mcds_dot_exe . mrds-package . mrds_opt . nlminb_wrapper . p.det . p.dist.table . parse.optimx . pdot.dsr.integrate.logistic . plot.det.tables . plot.ds . plot.io.fi . plot.io . plot.rem.fi . plot.rem . plot.trial.fi . plot.trial . plot_cond . plot_layout . plot_uncond . predict.ds . print.ddf.gof . print.ddf . print.det.tables . print.dht . print.p_dist_table . print.summary.ds . print.summary.io.fi . print.summary.io . print.summary.rem.fi . print.summary.rem . print.summary.trial.fi . print.summary.trial . prob.deriv . prob.se . process.data . pronghorn . ptdata.distance . ptdata.dual . ptdata.removal . ptdata.single . qqplot.ddf . rem.glm . rescale_pars . sample_ddf . setbounds . setcov . setinitial.ds . sim.mix . solvecov . stake77 . stake78 . summary.ds . summary.io.fi . summary.io . summary.rem.fi . summary.rem . summary.trial.fi . summary.trial . survey.region.dht . test.breaks . varn . 
Some associated R codes: AIC.R . DeltaMethod.R . NCovered.R . NCovered.ds.R . NCovered.io.R . NCovered.io.fi.R . NCovered.rem.R . NCovered.rem.fi.R . NCovered.trial.R . NCovered.trial.fi.R . add.df.covar.line.R . adj.check.order.R . adjfct.cos.R . adjfct.herm.R . adjfct.poly.R . apex.gamma.R . assign.default.values.R . assign.par.R . average.line.R . average.line.cond.R . calc.se.Np.R . cdf.ds.R . cds.R . check.bounds.R . check.mono.R . coef.ds.R . coef.io.R . coef.io.fi.R . coef.rem.R . coef.rem.fi.R . coef.trial.R . coef.trial.fi.R . compute.Nht.R . covered.region.dht.R . create.bins.R . create.ddfobj.R . create.model.frame.R . create.varstructure.R . ddf.R . ddf.ds.R . ddf.gof.R . ddf.io.R . ddf.io.fi.R . ddf.rem.R . ddf.rem.fi.R . ddf.trial.R . ddf.trial.fi.R . det.tables.R . detfct.R . detfct.fit.R . detfct.fit.mono.R . detfct.fit.opt.R . dht.R . dht.deriv.R . dht.se.R . fixform.R . flnl.R . flt.var.R . g0.R . getpar.R . gof.ds.R . gof.io.R . gof.io.fi.R . gof.pvalues.R . gof.rem.R . gof.rem.fi.R . gof.trial.R . gof.trial.fi.R . gstdint.R . hermite.poly.R . histline.R . integratedetfct.logistic.R . integratelogistic.R . integratelogistic.analytic.R . integratelogisticdup.R . io.glm.R . is.linear.logistic.R . is.logistic.constant.R . keyfct.gamma.R . keyfct.hn.R . keyfct.hz.R . keyfct.th.R . keyfct.tpn.R . logLik.R . logisticbyx.R . logisticbyz.R . logisticdetfct.R . logisticdupbyx.R . logisticdupbyx_fast.R . logit.R . mcds.R . mcds_tools.R . model.description.R . mrds-package.R . nlminb_wrapper.R . optimx.setup.R . p.det.R . p.dist.table.R . parse.optimx.R . pcramer.R . pdot.dsr.integrate.logistic.R . plot.det.tables.R . plot.ds.R . plot.io.R . plot.io.fi.R . plot.rem.R . plot.rem.fi.R . plot.trial.R . plot.trial.fi.R . plot_cond.R . plot_layout.R . plot_uncond.R . predict.ds.R . predict.io.R . predict.io.fi.R . predict.rem.R . predict.rem.fi.R . predict.trial.R . predict.trial.fi.R . print.ddf.R . print.ddf.gof.R . print.det.tables.R . print.dht.R . print.summary.ds.R . print.summary.io.R . print.summary.io.fi.R . print.summary.rem.R . print.summary.rem.fi.R . print.summary.trial.R . print.summary.trial.fi.R . prob.deriv.R . prob.se.R . process.data.R . qqplot.ddf.R . rem.glm.R . rescale_pars.R . sample_ddf.R . scalecheck.R . scalevalue.R . setbounds.R . setcov.R . sethazard.R . setinitial.ds.R . sim.mix.R . solvecov.R . summary.ds.R . summary.io.R . summary.io.fi.R . summary.rem.R . summary.rem.fi.R . summary.trial.R . summary.trial.fi.R . survey.region.dht.R . test.breaks.R . varn.R . zzz.R .  Full mrds package functions and examples
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