Other packages > Find by keyword >

momentuHMM  

Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models
View on CRAN: Click here


Download and install momentuHMM package within the R console
Install from CRAN:
install.packages("momentuHMM")

Install from Github:
library("remotes")
install_github("cran/momentuHMM")

Install by package version:
library("remotes")
install_version("momentuHMM", "1.5.8")



Attach the package and use:
library("momentuHMM")
Maintained by
Brett McClintock
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-06-16
Latest Update: 2025-07-21
Description:
Extended tools for analyzing telemetry data using generalized hidden Markov models. Features of momentuHMM (pronounced ``momentum'') include data pre-processing and visualization, fitting HMMs to location and auxiliary biotelemetry or environmental data, biased and correlated random walk movement models, hierarchical HMMs, multiple imputation for incorporating location measurement error and missing data, user-specified design matrices and constraints for covariate modelling of parameters, random effects, decoding of the state process, visualization of fitted models, model checking and selection, and simulation. See McClintock and Michelot (2018) .
How to cite:
Brett McClintock (2017). momentuHMM: Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models. R package version 1.5.8, https://cran.r-project.org/web/packages/momentuHMM. Accessed 10 Nov. 2026.
Previous versions and publish date:
(2026-07-09 06:32), 1.0.0 (2017-06-16 22:02), 1.0.1 (2017-07-19 22:55), 1.1.0 (2017-08-16 00:20), 1.1.1 (2017-09-20 23:44), 1.2.0 (2017-10-20 11:09), 1.3.0 (2017-12-08 22:55), 1.4.0 (2018-02-27 18:33), 1.4.1 (2018-05-22 05:22), 1.4.2 (2018-06-20 07:18), 1.4.3 (2018-11-22 09:40), 1.5.0 (2019-12-18 03:10), 1.5.1 (2020-03-06 07:00), 1.5.2 (2021-01-08 20:20), 1.5.3 (2021-07-07 06:20), 1.5.4 (2021-09-03 06:30), 1.5.5 (2022-10-18 22:52), 1.5.6 (2025-07-22 01:20), 1.5.7 (2025-10-21 20:30)
Other packages that cited momentuHMM R package
View momentuHMM citation profile
Other R packages that momentuHMM depends, imports, suggests or enhances
Complete documentation for momentuHMM
Functions, R codes and Examples using the momentuHMM R package
Some associated functions: AIC.momentuHMM . AICweights . CIbeta . CIreal . HMMfits . MIfitHMM . MIpool . XBloop_rcpp . allProbs . checkPar0 . circAngles . crawlMerge . crawlWrap . crwData . crwHierData . crwHierSim . crwSim . dbern_rcpp . dbeta_rcpp . dcat_rcpp . dexp_rcpp . dgamma_rcpp . distAngle . dlnorm_rcpp . dlogis_rcpp . dmvnorm_rcpp . dnbinom_rcpp . dnorm_rcpp . dpois_rcpp . dt_rcpp . dvm_rcpp . dweibull_rcpp . dwrpcauchy_rcpp . exampleData . expandPar . fitHMM . formatHierHMM . getCovNames . getDM_rcpp . getPar . getPar0 . getParDM . getTrProbs . is.HMMfits . is.crwData . is.crwHierData . is.crwHierSim . is.crwSim . is.miHMM . is.miSum . is.momentuHMM . is.momentuHMMData . is.momentuHierHMM . is.momentuHierHMMData . logAlpha . logBeta . miHMM . miSum . mixtureProbs . momentuHMM . momentuHMMData . momentuHierHMM . momentuHierHMMData . n2w . nLogLike . nLogLike_rcpp . parDef . plot.crwData . plot.miHMM . plot.miSum . plot.momentuHMM . plot.momentuHMMData . plotPR . plotSat . plotSpatialCov . plotStates . plotStationary . prepData . print.miHMM . print.miSum . print.momentuHMM . pseudoRes . randomEffects . setModelName . setStateNames . simData . simObsData . stateProbs . stationary . summary.momentuHMMData . timeInStates . trMatrix_rcpp . turnAngle . viterbi . w2n . 
Some associated R codes: AIC_momentuHMM.R . AICweights.R . CIbeta.R . CIreal.R . HMMfits.R . MIfitHMM.R . MIpool.R . RcppExports.R . allProbs.R . checkInputs.R . checkPar0.R . circAngles.R . crawlMerge.R . crawlWrap.R . crwData.R . crwHierData.R . crwHierSim.R . crwSim.R . distAngle.R . exampleData.R . expandPar.R . fitHMM.R . formatHierFormula.R . formatHierHMM.R . formatRecharge.R . formatmiSum.R . getCovNames.R . getDM.R . getPar.R . getPar0.R . getParDM.R . getSplineDM.R . getTrProbs.R . getWorkBounds.R . getXB.R . get_fixParIndex.R . get_inflation.R . get_ncmean.R . get_retrySD.R . getboundInd.R . is_formula.R . logAlpha.R . logBeta.R . miHMM.R . miSum.R . mixtureProbs.R . momentuHMM.R . momentuHMMData.R . momentuHMM_utils.R . momentuHierHMM.R . momentuHierHMMData.R . moveData.R . moveHMMwrap.R . n2w.R . nLogLike.R . parDef.R . plotPR.R . plotSat.R . plotSpatialCov.R . plotStates.R . plotStationary.R . plot_crwData.R . plot_miHMM.R . plot_miSum.R . plot_momentuHMM.R . plot_momentuHMMData.R . prepData.R . printMessage.R . print_miHMM.R . print_miSum.R . print_momentuHMM.R . pseudoRes.R . randomEffects.R . rwrpcauchy.R . setModelName.R . setStateNames.R . simData.R . simHierData.R . simObsData.R . stateFormulas.R . stateProbs.R . stationary.R . summary_momentuHMMData.R . timeInStates.R . turnAngle.R . viterbi.R . w2n.R .  Full momentuHMM package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

CNLTtsa  
Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis
Implementations of recent complex-valued wavelet spectral procedures for analysis of irregularly sam ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
MazamaSpatialUtils  
Spatial Data Download and Utility Functions
A suite of conversion functions to create internally standardized spatial polygons data frames. Uti ...
Download / Learn more Package Citations See dependency  
rbooster  
AdaBoost Framework for Any Classifier
This is a simple package which provides a function that boosts pre-ready or custom-made classifiers ...
Download / Learn more Package Citations See dependency  
cosinor2  
Extended Tools for Cosinor Analysis of Rhythms
Statistical procedures for calculating population ...
Download / Learn more Package Citations See dependency  
OBIC  
Calculate the Open Bodem Index (OBI) Score
The Open Bodem Index (OBI) is a method to evaluate the quality of soils of agricultural fields in Th ...
Download / Learn more Package Citations See dependency  

29,369

R Packages

247,686

Dependencies

77,665

Author Associations

29,370

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA