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modelSSE  

Modelling Infectious Disease Superspreading from Contact Tracing Data
View on CRAN: Click here


Download and install modelSSE package within the R console
Install from CRAN:
install.packages("modelSSE")

Install from Github:
library("remotes")
install_github("cran/modelSSE")

Install by package version:
library("remotes")
install_version("modelSSE", "0.1-3")



Attach the package and use:
library("modelSSE")
Maintained by
Shi Zhao
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-06-30
Latest Update: 2023-09-07
Description:
Comprehensive analytical tools are provided to characterize infectious disease superspreading from contact tracing surveillance data. The underlying theoretical frameworks of this toolkit include branching process with transmission heterogeneity (Lloyd-Smith et al. (2005) ), case cluster size distribution (Nishiura et al. (2012) , Blumberg et al. (2014) , and Kucharski and Althaus (2015) ), and decomposition of reproduction number (Zhao et al. (2022) ).
How to cite:
Shi Zhao (2023). modelSSE: Modelling Infectious Disease Superspreading from Contact Tracing Data. R package version 0.1-3, https://cran.r-project.org/web/packages/modelSSE. Accessed 17 Jul. 2026.
Previous versions and publish date:
(2026-07-09 06:31), 0.1-1 (2023-06-30 13:10), 0.1-2 (2023-08-28 18:00)
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Complete documentation for modelSSE
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