Other packages > Find by keyword >

microsamplingDesign  

Finding Optimal Microsampling Designs for Non-Compartmental Pharmacokinetic Analysis
View on CRAN: Click here


Download and install microsamplingDesign package within the R console
Install from CRAN:
install.packages("microsamplingDesign")

Install from Github:
library("remotes")
install_github("cran/microsamplingDesign")

Install by package version:
library("remotes")
install_version("microsamplingDesign", "1.0.8")



Attach the package and use:
library("microsamplingDesign")
Maintained by
Adriaan Blommaert
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-05-02
Latest Update: 2021-10-13
Description:
Find optimal microsampling designs for non-compartmental pharacokinetic analysis using a general simulation methodology: Algorithm III of Barnett, Helen, Helena Geys, Tom Jacobs, and Thomas Jaki. (2017) "Optimal Designs for Non-Compartmental Analysis of Pharmacokinetic Studies. (currently unpublished)" This methodology consist of (1) specifying a pharmacokinetic model including variability among animals; (2) generating possible sampling times; (3) evaluating performance of each time point choice on simulated data; (4) generating possible schemes given a time point choice and additional constraints and finally (5) evaluating scheme performance on simulated data. The default settings differ from the article of Barnett and others, in the default pharmacokinetic model used and the parameterization of variability among animals. Details can be found in the package vignette. A 'shiny' web application is included, which guides users from model parametrization to optimal microsampling scheme.
How to cite:
Adriaan Blommaert (2018). microsamplingDesign: Finding Optimal Microsampling Designs for Non-Compartmental Pharmacokinetic Analysis. R package version 1.0.8, https://cran.r-project.org/web/packages/microsamplingDesign
Previous versions and publish date:
1.0.0 (2018-05-02 22:13), 1.0.2 (2018-05-14 15:32), 1.0.5 (2018-08-22 18:30), 1.0.6 (2019-03-20 16:50), 1.0.7 (2020-04-05 21:30), 1.0.8 (2021-10-13 15:52)
Other packages that cited microsamplingDesign R package
View microsamplingDesign citation profile
Other R packages that microsamplingDesign depends, imports, suggests or enhances
Functions, R codes and Examples using the microsamplingDesign R package
Some associated functions: PkData-class . PkModel-class . PkModelParent-class . PkModelRange-class . SetOfSchemes-class . SetOfTimePoints-class . addSchemes . changeDevSettings . checkConstraintsOk . check_scheme_exactNumberObsPerTimePoint . check_scheme_minObsPerTimePoint . check_subject_maxConsecSamples . construct2CompModel . constructSetOfSchemes . doAllSchemeChecks . estimatePopCurve . extractByRank . flagSchemesMeetingConstraints . flattenSetOfSchemes . formatTimePoints . genMVN . get2ComptModelCurve . getAllTimeOptions . getCoeffVariationError . getCombinationsWithMaxNRepetitions . getConstraintsExample . getCorrelationMatrix . getData . getDevRankingSettings . getDosingInfo . getExampleData . getExampleObjective . getExampleParameters . getExamplePkCurve . getExamplePkModel . getExamplePkModelRange . getExampleSetOfSchemes . getExampleSetOfTimePoints . getExampleTimeData . getExampleTimeZones . getIndividualParameters . getMMCurve . getModelFunction . getNSchemes . getNSubjects . getNames . getParameters . getPkData . getPkModel . getPkModelArticle . getPkModels . getRanking . getResultPerScheme . getSetOfSchemes . getSummaryRanks . getTimeChoicePerformance . getTimePoints . getTopNRanking . grapes-ARC-grapes . oneCompartmentOralModel . pkCurveStat . pkOdeModel2Compartments . plotAverageRat . plotMMCurve . plotMMKinetics . plotObject . rankBasedOnDirectory . rankObject . rankObjectWithRange . runMicrosamplingDesignApp . setCoeffVariationError . setCorrelationMatrix . setDosingInfo . setModelToAverageRat . setParameters . setRanking . setTimePoints . subsetOnTimePoints . summary-SetOfSchemes-method . summary . 
Some associated R codes: RcppExports.R . aaaGenerics.R . appFunctions.R . constraintFunctions.R . fastRankSchemes.R . internalHelpers.R . objectPkModel.R . objectPkModelParent.R . objectPkModelRange.R . objectSetOfSchemes.R . objectSetOfTimePoints.R . pkFunctions.R . rankScheme.R . rankTimePoints.R . schemeGenerator.R . schemeStatistics.R . timePointGeneration.R .  Full microsamplingDesign package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

rdbnomics  
Download DBnomics Data
R access to hundreds of millions data series from DBnomics API (). ...
Download / Learn more Package Citations See dependency  
steepness  
Testing Steepness of Dominance Hierarchies
The steepness package computes steepness as a property of dominance hierarchies. Steepness is define ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
mistral  
Methods in Structural Reliability
Various reliability analysis methods for rare event inference (computing failure probability and qua ...
Download / Learn more Package Citations See dependency  
critpath  
Setting the Critical Path in Project Management
Solving the problem of project management using CPM (Critical Path Method), PERT (Program Evaluation ...
Download / Learn more Package Citations See dependency  
ftaproxim  
Fault Tree Analysis Based on Proxel Simulation
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns