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microclass  

Methods for Taxonomic Classification of Prokaryotes
View on CRAN: Click here


Download and install microclass package within the R console
Install from CRAN:
install.packages("microclass")

Install from Github:
library("remotes")
install_github("cran/microclass")

Install by package version:
library("remotes")
install_version("microclass", "1.2")



Attach the package and use:
library("microclass")
Maintained by
Lars Snipen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-08-15
Latest Update: 2020-08-28
Description:
Functions for assigning 16S sequence data to a taxonomic level in the tree-of-life for prokaryotes.
How to cite:
Lars Snipen (2016). microclass: Methods for Taxonomic Classification of Prokaryotes. R package version 1.2, https://cran.r-project.org/web/packages/microclass. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0.1 (2016-09-08 10:46), 1.0 (2016-08-15 16:00), 1.1 (2017-01-17 19:41)
Other packages that cited microclass R package
View microclass citation profile
Other R packages that microclass depends, imports, suggests or enhances
Complete documentation for microclass
Functions, R codes and Examples using the microclass R package
Some associated functions: KmerCount . blastClassify16S . blastDbase16S . microclass-package . multinomClassify . multinomTrain . rdpClassify . rdpTrain . setParallel . small.16S . taxMachine . 
Some associated R codes: KmerCount.R . RcppExports.R . blast.R . datasets.R . microclass-package.R . multinom.R . rdpClassifier.R . taxMachine.R . zzz.R .  Full microclass package functions and examples
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