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microbiomeMQC  

Calculate 4 Key Reporting Measures
View on CRAN: Click here


Download and install microbiomeMQC package within the R console
Install from CRAN:
install.packages("microbiomeMQC")

Install from Github:
library("remotes")
install_github("cran/microbiomeMQC")

Install by package version:
library("remotes")
install_version("microbiomeMQC", "1.0.2")



Attach the package and use:
library("microbiomeMQC")
Maintained by
Jacob Dehinsilu
[Scholar Profile | Author Map]
First Published: 2024-09-16
Latest Update: 2024-09-16
Description:
Perform calculations for the WHO International Reference Reagents for the microbiome. Using strain, species or genera abundance tables generated through analysis of 16S ribosomal RNA sequencing or shotgun sequencing which included a reference reagent. This package will calculate measures of sensitivity, False positive relative abundance, diversity, and similarity based on mean average abundances with respect to the reference reagent.
How to cite:
Jacob Dehinsilu (2024). microbiomeMQC: Calculate 4 Key Reporting Measures. R package version 1.0.2, https://cran.r-project.org/web/packages/microbiomeMQC. Accessed 05 Apr. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited microbiomeMQC R package
View microbiomeMQC citation profile
Other R packages that microbiomeMQC depends, imports, suggests or enhances
Complete documentation for microbiomeMQC
Functions, R codes and Examples using the microbiomeMQC R package
Full microbiomeMQC package functions and examples
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