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microbial  

Do 16s Data Analysis and Generate Figures
View on CRAN: Click here


Download and install microbial package within the R console
Install from CRAN:
install.packages("microbial")

Install from Github:
library("remotes")
install_github("cran/microbial")

Install by package version:
library("remotes")
install_version("microbial", "0.0.21")



Attach the package and use:
library("microbial")
Maintained by
Kai Guo
[Scholar Profile | Author Map]
First Published: 2020-12-07
Latest Update: 2021-11-01
Description:
Provides functions to enhance the available statistical analysis procedures in R by providing simple functions to analysis and visualize the 16S rRNA data.Here we present a tutorial with minimum working examples to demonstrate usage and dependencies.
How to cite:
Kai Guo (2020). microbial: Do 16s Data Analysis and Generate Figures. R package version 0.0.21, https://cran.r-project.org/web/packages/microbial. Accessed 14 Mar. 2025.
Previous versions and publish date:
0.0.17 (2020-12-07 08:40), 0.0.18 (2021-04-01 00:10), 0.0.19 (2021-04-01 23:30), 0.0.20 (2021-11-01 16:40)
Other packages that cited microbial R package
View microbial citation profile
Other R packages that microbial depends, imports, suggests or enhances
Complete documentation for microbial
Functions, R codes and Examples using the microbial R package
Some associated functions: betadiv . betatest . biomarker . buildTree . data-physeq . difftest . distcolor . do_aov . do_ttest . do_wilcox . dot-checkfile . dot-getstar . dot-lda.fun . glmr . ldamarker . lightcolor . normalize . otu_table . phy_tree . plotLDA . plotalpha . plotbar . plotbeta . plotdiff . plotmarker . plotquality . preRef . prefilter . processSeq . psmelt . richness . sample_data . subset_samples . subset_taxa . tax_table . 
Some associated R codes: Functions.R . dada2.R . data.R . glmr.R . misc.R . plot.R . zzz.R .  Full microbial package functions and examples
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