Other packages > Find by keyword >

microSTASIS  

Microbiota STability ASsessment via Iterative cluStering
View on CRAN: Click here


Download and install microSTASIS package within the R console
Install from CRAN:
install.packages("microSTASIS")

Install from Github:
library("remotes")
install_github("cran/microSTASIS")

Install by package version:
library("remotes")
install_version("microSTASIS", "0.1.0")



Attach the package and use:
library("microSTASIS")
Maintained by
Pedro Snchez-Snchez
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-09-14
Latest Update:
Description:
The toolkit STASIS has been developed for the stability analysis of microbiota in a temporal framework by leveraging on iterative clustering. Concretely the core function uses Hartigan-Wong k-means algorithm as many times as possible for stressing out paired samples from the same individuals to test if they remain together for multiple numbers of clusters over a whole data set of individuals. Moreover the package includes multiple functions to subset samples from paired times validate the results or visualize the output.
How to cite:
Pedro Snchez-Snchez (2021). microSTASIS: Microbiota STability ASsessment via Iterative cluStering. R package version 0.1.0, https://cran.r-project.org/web/packages/microSTASIS. Accessed 06 Oct. 2026.
Previous versions and publish date:
(2026-07-09 06:30), 0.1.0 (2021-09-14 08:40)
Other packages that cited microSTASIS R package
View microSTASIS citation profile
Other R packages that microSTASIS depends, imports, suggests or enhances
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

gecko  
Geographical Ecology and Conservation Knowledge Online
Includes a collection of geographical analysis functions aimed primarily at ecology and conservation ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
gRim  
Graphical Interaction Models
Provides the following types of models: Models for contingency tables (i.e. log-linear models) Grap ...
Download / Learn more Package Citations See dependency  

28,905

R Packages

247,686

Dependencies

76,495

Author Associations

28,906

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA