Other packages > Find by keyword >

mhcnuggetsr  

Call MHCnuggets
View on CRAN: Click here


Download and install mhcnuggetsr package within the R console
Install from CRAN:
install.packages("mhcnuggetsr")

Install from Github:
library("remotes")
install_github("cran/mhcnuggetsr")

Install by package version:
library("remotes")
install_version("mhcnuggetsr", "1.1")



Attach the package and use:
library("mhcnuggetsr")
Maintained by
Richèl J.C. Bilderbeek
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-11-04
Latest Update: 2020-11-04
Description:
MHCnuggets () is a Python tool to predict MHC class I and MHC class II epitopes. This package allows one to call MHCnuggets from R.
How to cite:
Richèl J.C. Bilderbeek (2020). mhcnuggetsr: Call MHCnuggets. R package version 1.1, https://cran.r-project.org/web/packages/mhcnuggetsr. Accessed 06 Mar. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited mhcnuggetsr R package
View mhcnuggetsr citation profile
Other R packages that mhcnuggetsr depends, imports, suggests or enhances
Complete documentation for mhcnuggetsr
Functions, R codes and Examples using the mhcnuggetsr R package
Some associated functions: are_mhcnuggets_names . check_mhc_class . check_mhcnuggets_installation . check_mhcnuggets_options . check_mhcnuggets_options_names . create_mhcnuggets_options . create_temp_peptides_path . create_test_mhcnuggets_options . default_params_doc . downgrade_pip . get_default_mhcnuggets_folder . get_example_filename . get_example_filenames . get_mhc_1_haplotypes . get_mhc_2_haplotypes . get_mhcnuggets_url . get_mhcnuggets_version . get_pip_version . get_python_package_versions . get_trained_mhc_1_haplotypes . get_trained_mhc_2_haplotypes . install_mhcnuggets . install_pip . is_mhcnuggets_installed . is_mhcnuggets_name . is_mhcnuggets_options . is_on_appveyor . is_on_ci . is_on_travis . is_pip_installed . mhcnuggetsr . mhcnuggetsr_report . mhcnuggetsr_self_test . predict_ic50 . predict_ic50_from_file . predict_ic50s . set_is_mhcnuggets_installed . set_pip_version . to_mhcnuggets_name . to_mhcnuggets_names . uninstall_mhcnuggets . uninstall_pip . upgrade_pip . 
Some associated R codes: are_mhcnuggets_names.R . check_mhc_class.R . check_mhcnuggets_installation.R . check_mhcnuggets_options.R . create_mhcnuggets_options.R . create_temp_peptides_path.R . create_test_mhcnuggets_options.R . default_params_doc.R . downgrade_pip.R . get_default_mhcnuggets_folder.R . get_example_filename.R . get_example_filenames.R . get_mhc_1_haplotypes.R . get_mhc_2_haplotypes.R . get_mhcnuggets_url.R . get_mhcnuggets_version.R . get_pip_version.R . get_python_package_versions.R . get_trained_mhc_1_haplotypes.R . get_trained_mhc_2_haplotypes.R . install_mhcnuggets.R . install_pip.R . is_mhcnuggets_installed.R . is_mhcnuggets_name.R . is_mhcnuggets_options.R . is_on_ci.R . is_pip_installed.R . mhcnuggetsr.R . mhcnuggetsr_report.R . mhcnuggetsr_self_test.R . predict_ic50.R . predict_ic50_from_file.R . predict_ic50s.R . set_is_mhcnuggets_installed.R . set_pip_version.R . to_mhcnuggets_name.R . to_mhcnuggets_names.R . uninstall_mhcnuggets.R . uninstall_pip.R . upgrade_pip.R .  Full mhcnuggetsr package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

EMVS  
The Expectation-Maximization Approach to Bayesian Variable Selection
An efficient expectation-maximization algorithm for fitting Bayesian spike-and-slab regularization p ...
Download / Learn more Package Citations See dependency  
solitude  
An Implementation of Isolation Forest
Isolation forest is anomaly detection method introduced by the paper Isolation based Anomaly Detecti ...
Download / Learn more Package Citations See dependency  
lbfgs  
Limited-memory BFGS Optimization
A wrapper built around the libLBFGS optimization library by Naoaki Okazaki. The lbfgs package implem ...
Download / Learn more Package Citations See dependency  
mlr3viz  
Visualizations for 'mlr3'
Visualization package of the 'mlr3' ecosystem. It features plots for mlr3 objects such as tasks, le ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
DatabionicSwarm  
Swarm Intelligence for Self-Organized Clustering
Algorithms implementing populations of agents that interact with one another and sense their environ ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,244

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA