R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
metasnf
View on CRAN: Click
here
Download and install metasnf package within the R console
Install from CRAN:
install.packages("metasnf")
Install from Github:
library("remotes")
install_github("cran/metasnf") Install by package version:
library("remotes")
install_version("metasnf", "2.1.2") Attach the package and use:
library("metasnf")
Maintained by
Prashanth S Velayudhan
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-11-08
Latest Update: 2025-04-28
Description:
Framework to facilitate patient subtyping with similarity network fusion and meta clustering. The similarity network fusion (SNF) algorithm was introduced by Wang et al. (2014) in <doi:10.1038/nmeth.2810>. SNF is a data integration approach that can transform high-dimensional and diverse data types into a single similarity network suitable for clustering with minimal loss of information from each initial data source. The meta clustering approach was introduced by Caruana et al. (2006) in <doi:10.1109/ICDM.2006.103>. Meta clustering involves generating a wide range of cluster solutions by adjusting clustering hyperparameters, then clustering the solutions themselves into a manageable number of qualitatively similar solutions, and finally characterizing representative solutions to find ones that are best for the user's specific context. This package provides a framework to easily transform multi-modal data into a wide range of similarity network fusion-derived cluster solutions as well as to visualize, characterize, and validate those solutions. Core package functionality includes easy customization of distance metrics, clustering algorithms, and SNF hyperparameters to generate diverse clustering solutions; calculation and plotting of associations between features, between patients, and between cluster solutions; and standard cluster validation approaches including resampled measures of cluster stability, standard metrics of cluster quality, and label propagation to evaluate generalizability in unseen data. Associated vignettes guide the user through using the package to identify patient subtypes while adhering to best practices for unsupervised learning.
How to cite:
Prashanth S Velayudhan (2024). metasnf: Meta Clustering with Similarity Network Fusion. R package version 2.1.2, https://cran.r-project.org/web/packages/metasnf. Accessed 04 Jul. 2026.
Previous versions and publish date:
Other packages that cited metasnf R package
View metasnf citation profile
Other R packages that metasnf depends,
imports, suggests or enhances
Complete documentation for metasnf
Functions, R codes and Examples using
the metasnf R package
Full metasnf package
functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
musica
Provides functions allowing for (1) easy aggregation of multivariate time series into custom time sc ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Martin Hanel (view profile)
missCompare
Offers a convenient pipeline to test and compare various missing data
imputation algorithms on simu ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Tibor V. Varga (view profile)
SurvCorr
Estimates correlation coefficients with associated confidence limits for bivariate, partially censo ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Georg Heinze (view profile)
multiwayvcov
Exports two functions implementing
multi-way clustering using the method suggested by Cameron, Gelb ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Nathaniel Graham (view profile)
PELVIS
An R-Shiny application implementing a method of sexing the human os coxae based on logistic regressi ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Frédéric Santos (view profile)
quickcode
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
27,653
R Packages
236,180
Dependencies
73,674
Author Associations
27,536
Publication Badges
