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metamorphr  

Tidy and Streamlined Metabolomics Data Workflows
View on CRAN: Click here


Download and install metamorphr package within the R console
Install from CRAN:
install.packages("metamorphr")

Install from Github:
library("remotes")
install_github("cran/metamorphr")

Install by package version:
library("remotes")
install_version("metamorphr", "0.2.0")



Attach the package and use:
library("metamorphr")
Maintained by
Yannik Schermer
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-09-01
Latest Update: 2025-09-01
Description:
Facilitate tasks typically encountered during metabolomics data analysis including data import, filtering, missing value imputation (Stacklies et al. (2007) <doi:10.1093/bioinformatics/btm069>, Stekhoven et al. (2012) <doi:10.1093/bioinformatics/btr597>, Tibshirani et al. (2017) <doi:10.18129/B9.BIOC.IMPUTE>, Troyanskaya et al. (2001) <doi:10.1093/bioinformatics/17.6.520>), normalization (Bolstad et al. (2003) <doi:10.1093/bioinformatics/19.2.185>, Dieterle et al. (2006) <doi:10.1021/ac051632c >, Zhao et al. (2020) <doi:10.1038/s41598-020-72664-6>) transformation, centering and scaling (Van Den Berg et al. (2006) <doi:10.1186/1471-2164-7-142>) as well as statistical tests and plotting. 'metamorphr' introduces a tidy (Wickham et al. (2019) <doi:10.21105/joss.01686>) format for metabolomics data and is designed to make it easier to build elaborate analysis workflows and to integrate them with 'tidyverse' packages including 'dplyr' and 'ggplot2'.
How to cite:
Yannik Schermer (2025). metamorphr: Tidy and Streamlined Metabolomics Data Workflows. R package version 0.2.0, https://cran.r-project.org/web/packages/metamorphr. Accessed 25 Jun. 2026.
Previous versions and publish date:
0.1.1 (2025-09-01 19:10), 0.2.0 (2025-10-09 11:20), 0.3.0 (2026-03-04 14:30), 0.4.0 (2026-06-09 12:40)
Other packages that cited metamorphr R package
View metamorphr citation profile
Other R packages that metamorphr depends, imports, suggests or enhances
Complete documentation for metamorphr
Functions, R codes and Examples using the metamorphr R package
Full metamorphr package functions and examples
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