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metaGE  

Meta-Analysis for Detecting Genotype x Environment Associations
View on CRAN: Click here


Download and install metaGE package within the R console
Install from CRAN:
install.packages("metaGE")

Install from Github:
library("remotes")
install_github("cran/metaGE")

Install by package version:
library("remotes")
install_version("metaGE", "1.2.2")



Attach the package and use:
library("metaGE")
Maintained by
Annaïg De Walsche
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-03-08
Latest Update: 2025-07-21
Description:
Meta-analysis of genome-wide association studies for studying Genotype x Environment interactions. The 4 main functions of the package metaGE.collect(), metaGE.cor(), metaGE.fit() and metaGE.test() correspond to 4 steps to perform the meta-analysis: Collecting the results of genome-wide association studies data from different files; Inferring the inter-environment correlation matrix; Performing global test procedure for quantitative trait loci detection (using a Fixed or Random effect model); Performing tests of contrast or meta-regression using an environmental co-factor. (De Walsche, A., et al. (2023) ).
How to cite:
Annaïg De Walsche (2023). metaGE: Meta-Analysis for Detecting Genotype x Environment Associations. R package version 1.2.2, https://cran.r-project.org/web/packages/metaGE. Accessed 07 Mar. 2026.
Previous versions and publish date:
1.0.0 (2023-03-08 20:40), 1.0.1 (2023-08-30 15:00), 1.0.2 (2023-09-11 14:00), 1.0.3 (2023-09-28 10:50), 1.1.0 (2024-07-31 12:40), 1.2.0 (2025-02-19 00:50), 1.2.1 (2025-02-23 00:10)
Other packages that cited metaGE R package
View metaGE citation profile
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Complete documentation for metaGE
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