Other packages > Find by keyword >

mclink  

Metabolic Pathway Completeness and Abundance Calculation
View on CRAN: Click here


Download and install mclink package within the R console
Install from CRAN:
install.packages("mclink")

Install from Github:
library("remotes")
install_github("cran/mclink")

Install by package version:
library("remotes")
install_version("mclink", "1.1.1")



Attach the package and use:
library("mclink")
Maintained by
Liuyang Li
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-08-22
Latest Update: 2025-08-22
Description:
Provides tools for analyzing metabolic pathway completeness, abundance, and transcripts using KEGG Orthology (KO) data from (meta)genomic and (meta)transcriptomic studies. Supports both completeness (presence/absence) and abundance-weighted analyses. Includes built-in KEGG reference datasets. For more details see Li et al. (2023) <doi:10.1038/s41467-023-42193-7>.
How to cite:
Liuyang Li (2025). mclink: Metabolic Pathway Completeness and Abundance Calculation. R package version 1.1.1, https://cran.r-project.org/web/packages/mclink. Accessed 26 Jun. 2026.
Previous versions and publish date:
1.1 (2025-08-22 20:20)
Other packages that cited mclink R package
View mclink citation profile
Other R packages that mclink depends, imports, suggests or enhances
Complete documentation for mclink
Functions, R codes and Examples using the mclink R package
Full mclink package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

ggblanket  
Simplify 'ggplot2' Visualisation
Simplify 'ggplot2' visualisation with 'ggblanket' wrapper functions. ...
Download / Learn more Package Citations See dependency  
infotheo  
Information-Theoretic Measures
Implements various measures of information theory based on several entropy estimators. ...
Download / Learn more Package Citations See dependency  
PoisBinOrdNor  
Data Generation with Poisson, Binary, Ordinal and Normal Components
Generation of multiple count, binary, ordinal and normal variables simultaneously given the marginal ...
Download / Learn more Package Citations See dependency  
colormap  
Color Palettes using Colormaps Node Module
Allows to generate colors from palettes defined in the colormap module of 'Node.js'. (see ...
Download / Learn more Package Citations See dependency  
tactile  
New and Extended Plots, Methods, and Panel Functions for 'lattice'
Extensions to 'lattice', providing new high-level functions, methods for existing functions, panel f ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA