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mappeR  

Construct and Visualize TDA Mapper Graphs
View on CRAN: Click here


Download and install mappeR package within the R console
Install from CRAN:
install.packages("mappeR")

Install from Github:
library("remotes")
install_github("cran/mappeR")

Install by package version:
library("remotes")
install_version("mappeR", "1.3.0")



Attach the package and use:
library("mappeR")
Maintained by
George Clare Kennedy
[Scholar Profile | Author Map]
First Published: 2024-10-04
Latest Update: 2024-10-16
Description:
Topological data analysis (TDA) is a method of data analysis that uses techniques from topology to analyze high-dimensional data. Here we implement Mapper, an algorithm from this area developed by Singh, Mémoli and Carlsson (2007) which generalizes the concept of a Reeb graph <https://en.wikipedia.org/wiki/Reeb_graph>. The output graph is able to be visualized in R using 'igraph' or using a free network analysis software called 'Cytoscape', available for download from at <https://cytoscape.org/>.
How to cite:
George Clare Kennedy (2024). mappeR: Construct and Visualize TDA Mapper Graphs. R package version 1.3.0, https://cran.r-project.org/web/packages/mappeR. Accessed 20 Feb. 2025.
Previous versions and publish date:
0.1.3 (2024-10-04 12:20), 0.1.5 (2024-10-04 18:40), 1.0.0 (2024-10-07 09:00), 1.1.0 (2024-10-16 07:30), 1.2.0 (2024-10-23 07:20), 1.3.0 (2024-10-30 18:50), 2.0.0 (2025-02-17 01:40)
Other packages that cited mappeR R package
View mappeR citation profile
Other R packages that mappeR depends, imports, suggests or enhances
Complete documentation for mappeR
Functions, R codes and Examples using the mappeR R package
Full mappeR package functions and examples
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