R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
mExplorer
View on CRAN: Click
here
Download and install mExplorer package within the R console
Install from CRAN:
install.packages("mExplorer")
Install from Github:
library("remotes")
install_github("cran/mExplorer")
Install by package version:
library("remotes")
install_version("mExplorer", "1.0.0")
Attach the package and use:
library("mExplorer")
Maintained by
Juri Reimand
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-08-24
Latest Update: 2017-08-24
Description:
The method 'm:Explorer' associates a given list of target genes (e.g. those involved in a biological process) to gene regulators such as transcription factors. Transcription factors that bind DNA near significantly many target genes or correlate with target genes in transcriptional (microarray or RNAseq data) are selected. Selection of candidate master regulators is carried out using multinomial regression models, likelihood ratio tests and multiple testing correction. Reference: m:Explorer: multinomial regression models reveal positive and negative regulators of longevity in yeast quiescence. Juri Reimand, Anu Aun, Jaak Vilo, Juan M Vaquerizas, Juhan Sedman and Nicholas M Luscombe. Genome Biology (2012) 13:R55 .
How to cite:
Juri Reimand (2017). mExplorer: Identifying Master Gene Regulators from Gene Expression and DNA-Binding Data. R package version 1.0.0, https://cran.r-project.org/web/packages/mExplorer. Accessed 30 Jan. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited mExplorer R package
View mExplorer citation profile
Other R packages that mExplorer depends,
imports, suggests or enhances
Complete documentation for mExplorer
Functions, R codes and Examples using
the mExplorer R package
Some associated functions: mExplorer . prepare_gmt_input . small_test_dframe . small_test_response_vec . yeastCCgenes . yeastTFdata .
Some associated R codes: mExplorer.R . Full mExplorer package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by
helping add
Reviews / comments / questions /suggestions ↴↴↴
Today's Hot Picks in Authors and Packages
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
kesernetwork
A shiny app to visualize the knowledge networks for the code concepts. Using co-occurrence matrices ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Su-Chun Cheng (view profile)
fastmit
A mutual information estimator based on k-nearest neighbor method proposed by A. Kraskov, et al. (20 ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Shiyun Lin (view profile)
GGMncv
Estimate Gaussian graphical models with nonconvex penalties ,
including ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Donald Williams (view profile)
cinaR
Differential analyses and Enrichment pipeline for bulk 'ATAC-seq' data
analyses. This package combi ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Onur Karakaslar (view profile)
WtTopsis
Evaluation of alternatives based on multiple criteria using weighted technique for Order preference ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: zhengyu wu (view profile)