Other packages > Find by keyword >

locuszoomr  

Gene Locus Plot with Gene Annotations
View on CRAN: Click here


Download and install locuszoomr package within the R console
Install from CRAN:
install.packages("locuszoomr")

Install from Github:
library("remotes")
install_github("cran/locuszoomr")

Install by package version:
library("remotes")
install_version("locuszoomr", "0.3.8")



Attach the package and use:
library("locuszoomr")
Maintained by
Myles Lewis
[Scholar Profile | Author Map]
First Published: 2023-11-01
Latest Update: 2024-02-17
Description:
Publication-ready regional gene locus plots similar to those produced by the web interface 'LocusZoom' , but running locally in R. Genetic or genomic data with gene annotation tracks are plotted via R base graphics, 'ggplot2' or 'plotly', allowing flexibility and easy customisation including laying out multiple locus plots on the same page. It uses the 'LDlink' API to query linkage disequilibrium data from the 1000 Genomes Project and can overlay this on plots.
How to cite:
Myles Lewis (2023). locuszoomr: Gene Locus Plot with Gene Annotations. R package version 0.3.8, https://cran.r-project.org/web/packages/locuszoomr. Accessed 04 Apr. 2025.
Previous versions and publish date:
0.1.1 (2023-11-01 14:10), 0.1.2 (2023-11-02 02:10), 0.1.3 (2023-12-06 05:30), 0.2.0 (2024-01-08 22:40), 0.2.1 (2024-02-17 15:30), 0.3.0 (2024-04-16 23:40), 0.3.1 (2024-07-03 22:40), 0.3.2 (2024-08-19 17:10), 0.3.4 (2024-09-06 12:10), 0.3.5 (2024-09-15 23:50), 0.3.6 (2025-01-26 01:10), 0.3.7 (2025-02-10 22:30)
Other packages that cited locuszoomr R package
View locuszoomr citation profile
Other R packages that locuszoomr depends, imports, suggests or enhances
Complete documentation for locuszoomr
Downloads during the last 30 days
03/0503/0603/0703/0803/0903/1003/1103/1203/1303/1403/1503/1603/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/2703/2803/2903/3003/3104/0104/0204/03Downloads for locuszoomr51015202530354045505560TrendBars

Today's Hot Picks in Authors and Packages

Rexperigen  
R Interface to Experigen
Provides convenience functions to communicate with an Experigen server: Experigen ( ...
Download / Learn more Package Citations See dependency  
PakPMICS2014HH  
Multiple Indicator Cluster Survey (MICS) 2014 Household Questionnaire Data for Punjab, Pakistan
Provides data set and function for exploration of Multiple Indicator Cluster Survey (MICS) 2014 Hous ...
Download / Learn more Package Citations See dependency  
GeDS  
Geometrically Designed Spline Regression
Spline Regression, Generalized Additive Models, and Component-wise Gradient Boosting, utilizing Geo ...
Download / Learn more Package Citations See dependency  
RMixpanel  
API for Mixpanel
Provides an interface to many endpoints of Mixpanel's Data Export, Engage and JQL API. The R functio ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
perryExamples  
Examples for Integrating Prediction Error Estimation into Regression Models
Examples for integrating package 'perry' for prediction error estimation into regression models. ...
Download / Learn more Package Citations See dependency  

23,990

R Packages

207,311

Dependencies

64,809

Author Associations

23,991

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA