Other packages > Find by keyword >

locuszoomr  

Gene Locus Plot with Gene Annotations
View on CRAN: Click here


Download and install locuszoomr package within the R console
Install from CRAN:
install.packages("locuszoomr")

Install from Github:
library("remotes")
install_github("cran/locuszoomr")

Install by package version:
library("remotes")
install_version("locuszoomr", "0.3.8")



Attach the package and use:
library("locuszoomr")
Maintained by
Myles Lewis
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-11-01
Latest Update: 2025-03-03
Description:
Publication-ready regional gene locus plots similar to those produced by the web interface 'LocusZoom' , but running locally in R. Genetic or genomic data with gene annotation tracks are plotted via R base graphics, 'ggplot2' or 'plotly', allowing flexibility and easy customisation including laying out multiple locus plots on the same page. It uses the 'LDlink' API to query linkage disequilibrium data from the 1000 Genomes Project and can overlay this on plots.
How to cite:
Myles Lewis (2023). locuszoomr: Gene Locus Plot with Gene Annotations. R package version 0.3.8, https://cran.r-project.org/web/packages/locuszoomr. Accessed 10 Mar. 2026.
Previous versions and publish date:
0.1.1 (2023-11-01 14:10), 0.1.2 (2023-11-02 02:10), 0.1.3 (2023-12-06 05:30), 0.2.0 (2024-01-08 22:40), 0.2.1 (2024-02-17 15:30), 0.3.0 (2024-04-16 23:40), 0.3.1 (2024-07-03 22:40), 0.3.2 (2024-08-19 17:10), 0.3.4 (2024-09-06 12:10), 0.3.5 (2024-09-15 23:50), 0.3.6 (2025-01-26 01:10), 0.3.7 (2025-02-10 22:30)
Other packages that cited locuszoomr R package
View locuszoomr citation profile
Other R packages that locuszoomr depends, imports, suggests or enhances
Complete documentation for locuszoomr
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

plyr  
Tools for Splitting, Applying and Combining Data
A set of tools that solves a common set of problems: you need to break a big problem down into mana ...
Download / Learn more Package Citations See dependency  
envirem  
Generation of ENVIREM Variables
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables. ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
gena  
Genetic Algorithm and Particle Swarm Optimization
Implements genetic algorithm and particle swarm algorithm for real-valued functions. Various modific ...
Download / Learn more Package Citations See dependency  

26,293

R Packages

225,784

Dependencies

70,376

Author Associations

26,294

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA