Other packages > Find by keyword >

locuszoomr  

Gene Locus Plot with Gene Annotations
View on CRAN: Click here


Download and install locuszoomr package within the R console
Install from CRAN:
install.packages("locuszoomr")

Install from Github:
library("remotes")
install_github("cran/locuszoomr")

Install by package version:
library("remotes")
install_version("locuszoomr", "0.3.8")



Attach the package and use:
library("locuszoomr")
Maintained by
Myles Lewis
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-11-01
Latest Update: 2025-03-03
Description:
Publication-ready regional gene locus plots similar to those produced by the web interface 'LocusZoom' , but running locally in R. Genetic or genomic data with gene annotation tracks are plotted via R base graphics, 'ggplot2' or 'plotly', allowing flexibility and easy customisation including laying out multiple locus plots on the same page. It uses the 'LDlink' API to query linkage disequilibrium data from the 1000 Genomes Project and can overlay this on plots.
How to cite:
Myles Lewis (2023). locuszoomr: Gene Locus Plot with Gene Annotations. R package version 0.3.8, https://cran.r-project.org/web/packages/locuszoomr. Accessed 13 Aug. 2026.
Previous versions and publish date:
(2026-07-19 17:30), 0.1.1 (2023-11-01 14:10), 0.1.2 (2023-11-02 02:10), 0.1.3 (2023-12-06 05:30), 0.2.0 (2024-01-08 22:40), 0.2.1 (2024-02-17 15:30), 0.3.0 (2024-04-16 23:40), 0.3.1 (2024-07-03 22:40), 0.3.2 (2024-08-19 17:10), 0.3.4 (2024-09-06 12:10), 0.3.5 (2024-09-15 23:50), 0.3.6 (2025-01-26 01:10), 0.3.7 (2025-02-10 22:30), 0.3.8 (2025-03-03 15:30)
Other packages that cited locuszoomr R package
View locuszoomr citation profile
Other R packages that locuszoomr depends, imports, suggests or enhances
Complete documentation for locuszoomr
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

iAdapt  
Two-Stage Adaptive Dose-Finding Clinical Trial Design
Simulate and implement early phase two-stage adaptive dose-finding design for binary and quasi-conti ...
Download / Learn more Package Citations See dependency  
IATscores  
Implicit Association Test Scores Using Robust Statistics
Compute several variations of the Implicit Association Test (IAT) scores, including the D scores (Gr ...
Download / Learn more Package Citations See dependency  
testDriveR  
Teaching Data for Statistics and Data Science
Provides data sets for teaching statistics and data science courses. It includes a sample of data f ...
Download / Learn more Package Citations See dependency  
kangar00  
Kernel Approaches for Nonlinear Genetic Association Regression
Methods to extract information on pathways, genes and various single-nucleotid polymorphisms (SNPs) ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

28,313

R Packages

239,283

Dependencies

74,752

Author Associations

28,314

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA