Other packages > Find by keyword >

lme4GS  

'lme4' for Genomic Selection
View on CRAN: Click here


Download and install lme4GS package within the R console
Install from CRAN:
install.packages("lme4GS")

Install from Github:
library("remotes")
install_github("cran/lme4GS")

Install by package version:
library("remotes")
install_version("lme4GS", "0.1")



Attach the package and use:
library("lme4GS")
Maintained by
Paulino Perez Rodriguez
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-04-08
Latest Update: 2025-04-08
Description:
Flexible functions that use 'lme4' as computational engine for fitting models used in Genomic Selection (GS). GS is a technology used for genetic improvement, and it has many advantages over phenotype-based selection. There are several statistical models that adequately approach the statistical challenges in GS, such as in linear mixed models (LMMs). The 'lme4' is the standard package for fitting linear and generalized LMMs in the R-package, but its use for genetic analysis is limited because it does not allow the correlation between individuals or groups of individuals to be defined. The 'lme4GS' package is focused on fitting LMMs with covariance structures defined by the user, bandwidth selection, and genomic prediction. The new package is focused on genomic prediction of the models used in GS and can fit LMMs using different variance-covariance matrices. Several examples of GS models are presented using this package as well as the analysis using real data. For more details see Caamal-Pat et.al. (2021) <doi:10.3389/fgene.2021.680569>.
How to cite:
Paulino Perez Rodriguez (2025). lme4GS: 'lme4' for Genomic Selection. R package version 0.1, https://cran.r-project.org/web/packages/lme4GS. Accessed 06 Jun. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited lme4GS R package
View lme4GS citation profile
Other R packages that lme4GS depends, imports, suggests or enhances
Complete documentation for lme4GS
Functions, R codes and Examples using the lme4GS R package
Full lme4GS package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

BALLI  
Expression RNA-Seq Data Analysis Based on Linear Mixed Model
Analysis of gene expression RNA-seq data using Bartlett-Adjusted Likelihood-based LInear model (BALL ...
Download / Learn more Package Citations See dependency  
IAPWS95  
Thermophysical Properties of Water and Steam
An implementation of the International Association for the Properties of Water (IAPWS) Formulation ...
Download / Learn more Package Citations See dependency  
odbc  
Connect to ODBC Compatible Databases (using the DBI Interface)
A DBI-compatible interface to ODBC databases. ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
rwavelet  
Wavelet Analysis
Perform wavelet analysis (orthogonal,translation invariant, tensorial, 1-2-3d transforms, thresholdi ...
Download / Learn more Package Citations See dependency  
worrrd  
Generate Wordsearch and Crossword Puzzles
Generate wordsearch and crossword puzzles using custom lists of words (and clues).Make them easy or ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,820

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA