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lit  

Latent Interaction Testing for Genome-Wide Studies
View on CRAN: Click here


Download and install lit package within the R console
Install from CRAN:
install.packages("lit")

Install from Github:
library("remotes")
install_github("cran/lit")

Install by package version:
library("remotes")
install_version("lit", "1.0.0")



Attach the package and use:
library("lit")
Maintained by
Andrew Bass
[Scholar Profile | Author Map]
First Published: 2023-08-15
Latest Update: 2023-08-15
Description:
Identifying latent genetic interactions in genome-wide association studies using the Latent Interaction Testing (LIT) framework. LIT is a flexible kernel-based approach that leverages information across multiple traits to detect latent genetic interactions without specifying or observing the interacting variable (e.g., environment). LIT accepts standard PLINK files as inputs to analyze large genome-wide association studies.
How to cite:
Andrew Bass (2023). lit: Latent Interaction Testing for Genome-Wide Studies. R package version 1.0.0, https://cran.r-project.org/web/packages/lit. Accessed 04 Apr. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited lit R package
View lit citation profile
Other R packages that lit depends, imports, suggests or enhances
Complete documentation for lit
Functions, R codes and Examples using the lit R package
Some associated functions: gamut_plink . lit . lit_h . lit_plink . marginal . marginal_plink . 
Some associated R codes: RcppExports.R . gamut.R . lit.R . marginal.R .  Full lit package functions and examples
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