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linelistBayes  

Bayesian Analysis of Epidemic Data Using Line List and Case Count Approaches
View on CRAN: Click here


Download and install linelistBayes package within the R console
Install from CRAN:
install.packages("linelistBayes")

Install from Github:
library("remotes")
install_github("cran/linelistBayes")

Install by package version:
library("remotes")
install_version("linelistBayes", "1.0")



Attach the package and use:
library("linelistBayes")
Maintained by
Chad Milando
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-05-03
Latest Update: 2024-05-03
Description:
Provides tools for performing Bayesian inference on epidemiological data to estimate the time-varying reproductive number and other related metrics. These methods were published in Li and White (2021) <doi:10.1371/journal.pcbi.1009210>. This package supports analyses based on aggregated case count data and individual line list data, facilitating enhanced surveillance and intervention planning for infectious diseases like COVID-19.
How to cite:
Chad Milando (2024). linelistBayes: Bayesian Analysis of Epidemic Data Using Line List and Case Count Approaches. R package version 1.0, https://cran.r-project.org/web/packages/linelistBayes. Accessed 08 Mar. 2026.
Previous versions and publish date:
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Complete documentation for linelistBayes
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