Other packages > Find by keyword >

leapp  

Latent Effect Adjustment After Primary Projection
View on CRAN: Click here


Download and install leapp package within the R console
Install from CRAN:
install.packages("leapp")

Install from Github:
library("remotes")
install_github("cran/leapp")

Install by package version:
library("remotes")
install_version("leapp", "1.3")



Attach the package and use:
library("leapp")
Maintained by
Yunting Sun
[Scholar Profile | Author Map]
First Published: 2012-04-07
Latest Update: 2022-06-19
Description:
These functions take a gene expression value matrix, a primary covariate vector, an additional known covariates matrix. A two stage analysis is applied to counter the effects of latent variables on the rankings of hypotheses. The estimation and adjustment of latent effects are proposed by Sun, Zhang and Owen (2011). "leapp" is developed in the context of microarray experiments, but may be used as a general tool for high throughput data sets where dependence may be involved.
How to cite:
Yunting Sun (2012). leapp: Latent Effect Adjustment After Primary Projection. R package version 1.3, https://cran.r-project.org/web/packages/leapp. Accessed 13 Apr. 2025.
Previous versions and publish date:
1.0 (2012-04-07 06:53), 1.1 (2014-01-06 21:01), 1.2 (2014-07-22 08:52)
Other packages that cited leapp R package
View leapp citation profile
Other R packages that leapp depends, imports, suggests or enhances
Complete documentation for leapp
Functions, R codes and Examples using the leapp R package
Some associated functions: AlternateSVD . FindAUC . FindFpr . FindPrec . FindRec . FindTpr . IPOD . IPODFUN . Pvalue . ROCplot . leapp-package . leapp . ridge . simdat . 
Some associated R codes: leapp.R .  Full leapp package functions and examples
Downloads during the last 30 days
03/1403/1503/1603/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/2703/2803/2903/3003/3104/0104/0204/0304/0404/0504/0604/0704/0804/0904/1004/1104/12Downloads for leapp0246810121416182022TrendBars

Today's Hot Picks in Authors and Packages

ggprism  
A 'ggplot2' Extension Inspired by 'GraphPad Prism'
Provides various themes, palettes, and other functions that are used to customise ggplots to look l ...
Download / Learn more Package Citations See dependency  
optimParallel  
Parallel Version of the L-BFGS-B Optimization Method
Provides a parallel version of the L-BFGS-B method of optim(). The main function of the package is o ...
Download / Learn more Package Citations See dependency  
MLeval  
Machine Learning Model Evaluation
Straightforward and detailed evaluation of machine learning models. 'MLeval' can produce receiver op ...
Download / Learn more Package Citations See dependency  
SPOTMisc  
Misc Extensions for the "SPOT" Package
Implements additional models, simulation tools, and interfaces as extensions to 'SPOT'. It provides ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
COMPoissonReg  
Conway-Maxwell Poisson (COM-Poisson) Regression
Fit Conway-Maxwell Poisson (COM-Poisson or CMP) regression models to count data (Sellers & Shmueli, ...
Download / Learn more Package Citations See dependency  

24,012

R Packages

207,311

Dependencies

64,867

Author Associations

24,013

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA