R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
l1kdeconv
View on CRAN: Click
here
Download and install l1kdeconv package within the R console
Install from CRAN:
install.packages("l1kdeconv")
Install from Github:
library("remotes")
install_github("cran/l1kdeconv") Install by package version:
library("remotes")
install_version("l1kdeconv", "1.2.0") Attach the package and use:
library("l1kdeconv")
Maintained by
Zhao Li
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-04-18
Latest Update: 2017-07-08
Description:
LINCS L1000 is a high-throughput technology that allows the gene expression measurement in a large number of assays. However, to fit the measurements of ~1000 genes in the ~500 color channels of LINCS L1000, every two landmark genes are designed to share a single channel. Thus, a deconvolution step is required to infer the expression values of each gene. Any errors in this step can be propagated adversely to the downstream analyses. We present a LINCS L1000 data peak calling R package l1kdeconv based on a new outlier detection method and an aggregate Gaussian mixture model. Upon the remove of outliers and the borrowing information among similar samples, l1kdeconv shows more stable and better performance than methods commonly used in LINCS L1000 data deconvolution.
How to cite:
Zhao Li (2017). l1kdeconv: Deconvolution for LINCS L1000 Data. R package version 1.2.0, https://cran.r-project.org/web/packages/l1kdeconv. Accessed 03 Jul. 2026.
Previous versions and publish date:
1.1.0 (2017-04-18 01:00)
Other packages that cited l1kdeconv R package
View l1kdeconv citation profile
Other R packages that l1kdeconv depends,
imports, suggests or enhances
Complete documentation for l1kdeconv
Functions, R codes and Examples using
the l1kdeconv R package
Some associated functions: getclusterranges . gmmplot . multigmmmanydata . multigmmplot . multigmmsamedistribu . multigmmsamedistribulik . multigmmsamedistribumulti . rmoutlier1d . splitgrp .
Some associated R codes: getclusterranges.R . gmmplot.R . multigmmmanydata.R . multigmmplot.R . multigmmsamedistribu.R . multigmmsamedistribulik.R . multigmmsamedistribumulti.R . rmoutlier1d.R . splitgrp.R . Full l1kdeconv package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
GaussSuppression
A statistical disclosure control tool to protect tables by suppression
using the Gaussian eliminati ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Øyvind Langsrud (view profile)
reportROC
Provides an easy way to report the results of ROC analysis, including:
1. an ROC curve.
2. the val ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Zhicheng Du (view profile)
gap.datasets
Datasets associated with the 'gap' package. Currently,
it includes an example data for regional ass ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Jing Hua Zhao (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
tabbycat
Functions for tabulating and summarising categorical variables. Most functions are designed to work ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Oliver Hawkins (view profile)
MANOVA.RM
Implemented are various tests for semi-parametric repeated measures
and general MANOVA designs that ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Sarah Friedrich (view profile)
27,653
R Packages
236,180
Dependencies
73,487
Author Associations
27,536
Publication Badges
