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krt  

Author, Validate, and Export Key Resources Tables
View on CRAN: Click here


Download and install krt package within the R console
Install from CRAN:
install.packages("krt")

Install from Github:
library("remotes")
install_github("cran/krt")

Install by package version:
library("remotes")
install_version("krt", "0.1.0")



Attach the package and use:
library("krt")
Maintained by
Ahmad Sofi-Mahmudi
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-09-12
Latest Update: 2026-09-12
Description:
A toolkit for creating, importing, validating, enriching, rendering, and depositing Key Resources Tables (KRTs). A KRT lists the resources used and generated in a study (antibodies, cell lines, organisms, chemicals, software, datasets, protocols, and more), each paired with a persistent identifier such as a Research Resource Identifier (RRID), a Digital Object Identifier (DOI), a repository accession, or a catalog number, so that resources are unambiguously identifiable and machine-actionable. The package models resources as typed, validated records around a neutral core schema and maps them to journal or funder output profiles, following the FAIR (Findable, Accessible, Interoperable, Reusable) principles of Wilkinson et al. (2016) <doi:10.1038/sdata.2016.18>. It normalizes and optionally resolves identifiers against public registries, extracts resources from manuscripts, and renders tables both in the STAR (Structured, Transparent, Accessible Reporting) Methods style used by Cell Press journals and in the style required by ASAP (Aligning Science Across Parkinson's), with an emphasis on transparency, reproducibility, and correct per-component licensing.
How to cite:
Ahmad Sofi-Mahmudi (2026). krt: Author, Validate, and Export Key Resources Tables. R package version 0.1.0, https://cran.r-project.org/web/packages/krt. Accessed 22 Sep. 2026.
Previous versions and publish date:
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Complete documentation for krt
Functions, R codes and Examples using the krt R package
Full krt package functions and examples
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