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jetset  

One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays
View on CRAN: Click here


Download and install jetset package within the R console
Install from CRAN:
install.packages("jetset")

Install from Github:
library("remotes")
install_github("cran/jetset")

Install by package version:
library("remotes")
install_version("jetset", "3.4.0")



Attach the package and use:
library("jetset")
Maintained by
Aron Eklund
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-07-21
Latest Update: 2017-04-05
Description:
On Affymetrix gene expression microarrays, a single gene may be measured by multiple probe sets. This can present a mild conundrum when attempting to evaluate a gene "signature" that is defined by gene names rather than by specific probe sets. This package provides a one-to-one mapping from gene to "best" probe set for four Affymetrix human gene expression microarrays: hgu95av2, hgu133a, hgu133plus2, and u133x3p. This package also includes the pre-calculated probe set quality scores that were used to define the mapping.
How to cite:
Aron Eklund (2015). jetset: One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays. R package version 3.4.0, https://cran.r-project.org/web/packages/jetset. Accessed 07 Nov. 2024.
Previous versions and publish date:
3.1.3 (2015-07-21 07:53), 3.3.0 (2016-06-29 02:40)
Other packages that cited jetset R package
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Other R packages that jetset depends, imports, suggests or enhances
Complete documentation for jetset
Functions, R codes and Examples using the jetset R package
Some associated functions: jmap . jscores . scores . 
Some associated R codes: jetset.R .  Full jetset package functions and examples
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