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jacpop  

Jaccard Index for Population Structure Identification
View on CRAN: Click here


Download and install jacpop package within the R console
Install from CRAN:
install.packages("jacpop")

Install from Github:
library("remotes")
install_github("cran/jacpop")

Install by package version:
library("remotes")
install_version("jacpop", "0.6")



Attach the package and use:
library("jacpop")
Maintained by
Dmitry Prokopenko
[Scholar Profile | Author Map]
First Published: 2016-07-26
Latest Update: 2019-06-03
Description:
Uses the Jaccard similarity index to account for population structure in sequencing studies. This method was specifically designed to detect population stratification based on rare variants, hence it will be especially useful in rare variant analysis.
How to cite:
Dmitry Prokopenko (2016). jacpop: Jaccard Index for Population Structure Identification. R package version 0.6, https://cran.r-project.org/web/packages/jacpop. Accessed 10 Apr. 2025.
Previous versions and publish date:
0.5 (2016-07-26 02:12)
Other packages that cited jacpop R package
View jacpop citation profile
Other R packages that jacpop depends, imports, suggests or enhances
Complete documentation for jacpop
Functions, R codes and Examples using the jacpop R package
Some associated functions: generate_pw_jaccard . 
Some associated R codes: jaccard_simple.R .  Full jacpop package functions and examples
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