Other packages > Find by keyword >

jacpop  

Jaccard Index for Population Structure Identification
View on CRAN: Click here


Download and install jacpop package within the R console
Install from CRAN:
install.packages("jacpop")

Install from Github:
library("remotes")
install_github("cran/jacpop")

Install by package version:
library("remotes")
install_version("jacpop", "0.6")



Attach the package and use:
library("jacpop")
Maintained by
Dmitry Prokopenko
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-07-26
Latest Update: 2019-06-03
Description:
Uses the Jaccard similarity index to account for population structure in sequencing studies. This method was specifically designed to detect population stratification based on rare variants, hence it will be especially useful in rare variant analysis.
How to cite:
Dmitry Prokopenko (2016). jacpop: Jaccard Index for Population Structure Identification. R package version 0.6, https://cran.r-project.org/web/packages/jacpop. Accessed 25 Jun. 2026.
Previous versions and publish date:
0.5 (2016-07-26 02:12)
Other packages that cited jacpop R package
View jacpop citation profile
Other R packages that jacpop depends, imports, suggests or enhances
Complete documentation for jacpop
Functions, R codes and Examples using the jacpop R package
Some associated functions: generate_pw_jaccard . 
Some associated R codes: jaccard_simple.R .  Full jacpop package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

foster  
Forest Structure Extrapolation with R
Set of tools to streamline the modeling of the relationship betweensatellite imagery time series or ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
airGRiwrm  
'airGR' Integrated Water Resource Management
Semi-distributed Precipitation-Runoff Modelling based on 'airGR' package models integrating human i ...
Download / Learn more Package Citations See dependency  
sitmo  
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
Provided within are two high quality and fast PPRNGs that may be used in an 'OpenMP' parallel enviro ...
Download / Learn more Package Citations See dependency  
edeaR  
Exploratory and Descriptive Event-Based Data Analysis
Exploratory and descriptive analysis of event based data. Provides methods for describing and select ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA