R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
ipADMIXTURE
View on CRAN: Click
here
Download and install ipADMIXTURE package within the R console
Install from CRAN:
install.packages("ipADMIXTURE")
Install from Github:
library("remotes")
install_github("cran/ipADMIXTURE") Install by package version:
library("remotes")
install_version("ipADMIXTURE", "0.1.2") Attach the package and use:
library("ipADMIXTURE")
Maintained by
Chainarong Amornbunchornvej
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-03-26
Latest Update: 2025-05-06
Description:
A data clustering package based on admixture ratios (Q matrix) of population structure. The framework is based on iterative Pruning procedure that performs data clustering by splitting a given population into subclusters until meeting the condition of stopping criteria the same as ipPCA, iNJclust, and IPCAPS frameworks. The package also provides a function to retrieve phylogeny tree that construct a neighbor-joining tree based on a similar matrix between clusters. By given multiple Q matrices with varying a number of ancestors (K), the framework define a similar value between clusters i,j as a minimum number K* that makes majority of members of two clusters are in the different clusters. This K* reflexes a minimum number of ancestors we need to splitting cluster i,j into different clusters if we assign K* clusters based on maximum admixture ratio of individuals. The publication of this package is at Chainarong Amornbunchornvej, Pongsakorn Wangkumhang, and Sissades Tongsima (2020) .
How to cite:
Chainarong Amornbunchornvej (2020). ipADMIXTURE: Iterative Pruning Population Admixture Inference Framework. R package version 0.1.2, https://cran.r-project.org/web/packages/ipADMIXTURE. Accessed 26 Aug. 2026.
Previous versions and publish date:
(2026-07-09 07:50), 0.1.0 (2020-03-26 12:00)
Other packages that cited ipADMIXTURE R package
View ipADMIXTURE citation profile
Other R packages that ipADMIXTURE depends,
imports, suggests or enhances
Complete documentation for ipADMIXTURE
Functions, R codes and Examples using
the ipADMIXTURE R package
Some associated functions: UD1_Qmat . UD1labels . biclustFunc . getPhyloTree . human27pop_Qmat . human27pop_labels . ipADMIXTURE . plotAdmixClusters . plotClusterLeaves . printClustersFromLabels .
Some associated R codes: biclustFunc.R . data.R . getPhyloTree.R . ipADMIXTURE.R . plotAdmixClusters.R . plotClusterLeaves.R . printClustersFromLabels.R . Full ipADMIXTURE package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
PCADSC
A suite of non-parametric, visual tools for assessing differences in data structures
for two datase ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Anne H. Petersen (view profile)
nextGenShinyApps
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
RCytoGPS
Defines classes and methods to process text-based
cytogenetics using the CytoGPS web site, then imp ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Kevin R. Coombes (view profile)
leafgl
Provides bindings to the 'Leaflet.glify' JavaScript library which extends the 'leaflet' JavaScript l ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Tim Appelhans (view profile)
SelvarMix
Performs a regularization approach to variable selection in themodel-based clustering and classifica ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Mohammed Sedki (view profile)
ncodeR
A set of techniques that can be used to develop, validate, and implement automated classifiers. A po ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Cody L Marquart (view profile)
28,332
R Packages
239,283
Dependencies
75,113
Author Associations
28,333
Publication Badges
