Other packages > Find by keyword >

intePareto  

Integrative Analysis of RNA-Seq and ChIP-Seq Data
View on CRAN: Click here


Download and install intePareto package within the R console
Install from CRAN:
install.packages("intePareto")

Install from Github:
library("remotes")
install_github("cran/intePareto")

Install by package version:
library("remotes")
install_version("intePareto", "0.1.2")



Attach the package and use:
library("intePareto")
Maintained by
Yingying Cao
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-10-09
Latest Update: 2023-02-01
Description:
Integrative analysis of gene expression RNA-Seq data and histonemodification data for user-defined sets of histone marks ChIP-Seq data todiscover consistent changes in genes between biological conditions.Additionally Pareto optimization is used to prioritize genes based on thelevel of consistent changes in both RNA-Seq and ChIP-Seq data.Method is described in Cao Y. et al. 2020 doi10.1186s12864-020-07205-6.
How to cite:
Yingying Cao (2019). intePareto: Integrative Analysis of RNA-Seq and ChIP-Seq Data. R package version 0.1.2, https://cran.r-project.org/web/packages/intePareto. Accessed 13 May. 2025.
Previous versions and publish date:
0.0.1 (2019-10-09 18:10), 0.1.1 (2021-06-12 00:40), 0.1.2 (2021-06-18 18:10)
Other packages that cited intePareto R package
View intePareto citation profile
Other R packages that intePareto depends, imports, suggests or enhances
Functions, R codes and Examples using the intePareto R package
Full intePareto package functions and examples
Downloads during the last 30 days
04/1404/1604/1704/1904/2104/2404/2504/2605/0705/0805/11Downloads for intePareto1234567TrendBars

Today's Hot Picks in Authors and Packages

hett  
Heteroscedastic t-Regression
Functions for the fitting and summarizing of heteroscedastic t-regression. ...
Download / Learn more Package Citations See dependency  
dtrackr  
Track your Data Pipelines
Track and document 'dplyr' data pipelines. As you filter, mutate, and join your way through a data ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
StanHeaders  
C++ Header Files for Stan
The C++ header files of the Stan project are provided by this package, but it contains little R code ...
Download / Learn more Package Citations See dependency  
tryCatchLog  
Advanced 'tryCatch()' and 'try()' Functions
Advanced tryCatch() and try() functions for better error handling (logging, stack trace with source ...
Download / Learn more Package Citations See dependency  
genlogis  
Generalized Logistic Distribution
Provides basic distribution functions for a generalized logistic distribution proposed by Rathie and ...
Download / Learn more Package Citations See dependency  

24,223

R Packages

207,311

Dependencies

65,402

Author Associations

24,224

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA