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intePareto  

Integrative Analysis of RNA-Seq and ChIP-Seq Data
View on CRAN: Click here


Download and install intePareto package within the R console
Install from CRAN:
install.packages("intePareto")

Install from Github:
library("remotes")
install_github("cran/intePareto")

Install by package version:
library("remotes")
install_version("intePareto", "0.1.2")



Attach the package and use:
library("intePareto")
Maintained by
Yingying Cao
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-10-09
Latest Update: 2023-02-01
Description:
Integrative analysis of gene expression RNA-Seq data and histonemodification data for user-defined sets of histone marks ChIP-Seq data todiscover consistent changes in genes between biological conditions.Additionally Pareto optimization is used to prioritize genes based on thelevel of consistent changes in both RNA-Seq and ChIP-Seq data.Method is described in Cao Y. et al. 2020 doi10.1186s12864-020-07205-6.
How to cite:
Yingying Cao (2019). intePareto: Integrative Analysis of RNA-Seq and ChIP-Seq Data. R package version 0.1.2, https://cran.r-project.org/web/packages/intePareto. Accessed 17 Feb. 2025.
Previous versions and publish date:
0.0.1 (2019-10-09 18:10), 0.1.1 (2021-06-12 00:40), 0.1.2 (2021-06-18 18:10)
Other packages that cited intePareto R package
View intePareto citation profile
Other R packages that intePareto depends, imports, suggests or enhances
Functions, R codes and Examples using the intePareto R package
Full intePareto package functions and examples
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