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incidence
View on CRAN: Click
here
Download and install incidence package within the R console
Install from CRAN:
install.packages("incidence")
Install from Github:
library("remotes")
install_github("cran/incidence") Install by package version:
library("remotes")
install_version("incidence", "1.7.6") Attach the package and use:
library("incidence")
Maintained by
Tim Taylor
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-11-03
Latest Update: 2025-06-19
Description:
Provides functions and classes to compute, handle and visualise
incidence from dated events for a defined time interval. Dates can be provided
in various standard formats. The class 'incidence' is used to store computed
incidence and can be easily manipulated, subsetted, and plotted. In addition,
log-linear models can be fitted to 'incidence' objects using 'fit'. This
package is part of the RECON ( ) toolkit
for outbreak analysis.
How to cite:
Tim Taylor (2016). incidence: Compute, Handle, Plot and Model Incidence of Dated Events. R package version 1.7.6, https://cran.r-project.org/web/packages/incidence. Accessed 04 Jun. 2026.
Previous versions and publish date:
1.0.0 (2016-11-03 12:14), 1.0.1 (2016-11-23 00:40), 1.1.0 (2016-12-13 19:54), 1.1.1 (2017-02-15 16:47), 1.1.2 (2017-03-24 20:07), 1.2.0 (2017-05-15 09:22), 1.2.1 (2017-11-12 12:59), 1.3.0 (2018-06-01 14:29), 1.3.1 (2018-06-11 15:34), 1.4.1 (2018-08-24 22:32), 1.5.0 (2018-11-01 12:20), 1.5.2 (2018-11-30 11:30), 1.5.4 (2019-01-15 06:50), 1.7.0 (2019-03-14 17:30), 1.7.1 (2020-03-25 16:50), 1.7.2 (2020-07-24 14:30), 1.7.3 (2020-11-04 17:30), 1.7.4 (2024-05-15 14:30), 1.7.5 (2024-05-31 12:10)
Other packages that cited incidence R package
View incidence citation profile
Other R packages that incidence depends,
imports, suggests or enhances
Complete documentation for incidence
Functions, R codes and Examples using
the incidence R package
Some associated functions: accessors . bootstrap . conversions . cumulate . estimate_peak . find_peak . fit . get_counts . get_dates . get_fit . group_names . incidence . palettes . plot.incidence . pool . subset .
Some associated R codes: bootstrap.R . check_boundaries.R . check_dates.R . check_dots.R . check_groups.R . check_interval.R . check_timespan.R . check_week.R . conversion.R . cumulate.R . dim.R . estimate_peak.R . extract_info.R . find_peak.R . fit.R . fit_optim_split.R . get_counts.R . get_dates.R . get_fit.R . get_info.R . get_interval.R . get_n.R . get_timespan.R . get_week.R . group_names.R . incidence.R . internals.R . make_breaks.R . make_incidence.R . palettes.R . plot.R . pool.R . print.R . scale_x_incidence.R . subset.R . trim_observations.R . valid_interval.R . zzz.R . Full incidence package functions and examples
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