Other packages > Find by keyword >

idiffomix  

Integrated Differential Analysis of Multi Omics Data using a Joint Mixture Model
View on CRAN: Click here


Download and install idiffomix package within the R console
Install from CRAN:
install.packages("idiffomix")

Install from Github:
library("remotes")
install_github("cran/idiffomix")

Install by package version:
library("remotes")
install_version("idiffomix", "1.0.0")



Attach the package and use:
library("idiffomix")
Maintained by
Koyel Majumdar
[Scholar Profile | Author Map]
First Published: 2025-01-13
Latest Update: 2025-01-13
Description:
A joint mixture model has been developed by Majumdar et al. (2025) <doi:10.48550/arXiv.2412.17511> that integrates information from gene expression data and methylation data at the modelling stage to capture their inherent dependency structure, enabling simultaneous identification of differentially methylated cytosine-guanine dinucleotide (CpG) sites and differentially expressed genes. The model leverages a joint likelihood function that accounts for the nested structure in the data, with parameter estimation performed using an expectation-maximisation algorithm.
How to cite:
Koyel Majumdar (2025). idiffomix: Integrated Differential Analysis of Multi Omics Data using a Joint Mixture Model. R package version 1.0.0, https://cran.r-project.org/web/packages/idiffomix. Accessed 15 May. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited idiffomix R package
View idiffomix citation profile
Other R packages that idiffomix depends, imports, suggests or enhances
Complete documentation for idiffomix
Functions, R codes and Examples using the idiffomix R package
Full idiffomix package functions and examples
Downloads during the last 30 days
04/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/2904/3005/0105/0205/0305/0405/0505/0605/0705/0805/0905/1005/1105/1205/1305/14Downloads for idiffomix02468101214TrendBars

Today's Hot Picks in Authors and Packages

RSQLite  
SQLite Interface for R
Embeds the SQLite database engine in R and provides an interface compliant with the DBI package. Th ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
olsrr  
Tools for Building OLS Regression Models
Tools designed to make it easier for users, particularly beginner/intermediate R users to build ord ...
Download / Learn more Package Citations See dependency  
vietnamcode  
Convert Vietnam Provincial Codes
Converts Vietnam's provinces' names and ID across different formats. Handles diacritics and differen ...
Download / Learn more Package Citations See dependency  
Maintainer: Anh Le (view profile)
lubridate  
Make Dealing with Dates a Little Easier
Functions to work with date-times and time-spans: fast and user friendly parsing of date-time data, ...
Download / Learn more Package Citations See dependency  

24,223

R Packages

207,311

Dependencies

65,402

Author Associations

24,224

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA