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iTOP  

Inferring the Topology of Omics Data
View on CRAN: Click here


Download and install iTOP package within the R console
Install from CRAN:
install.packages("iTOP")

Install from Github:
library("remotes")
install_github("cran/iTOP")

Install by package version:
library("remotes")
install_version("iTOP", "1.0.2")



Attach the package and use:
library("iTOP")
Maintained by
Nanne Aben
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-03-22
Latest Update: 2018-06-13
Description:
Infers a topology of relationships between different datasets, such as multi-omics and phenotypic data recorded on the same samples. We based this methodology on the RV coefficient (Robert & Escoufier, 1976, ), a measure of matrix correlation, which we have extended for partial matrix correlations and binary data (Aben et al., 2018, ).
How to cite:
Nanne Aben (2018). iTOP: Inferring the Topology of Omics Data. R package version 1.0.2, https://cran.r-project.org/web/packages/iTOP. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0.0 (2018-03-22 13:04), 1.0.1 (2018-04-04 15:11)
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