Other packages > Find by keyword >

iTOP  

Inferring the Topology of Omics Data
View on CRAN: Click here


Download and install iTOP package within the R console
Install from CRAN:
install.packages("iTOP")

Install from Github:
library("remotes")
install_github("cran/iTOP")

Install by package version:
library("remotes")
install_version("iTOP", "1.0.2")



Attach the package and use:
library("iTOP")
Maintained by
Nanne Aben
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-03-22
Latest Update: 2018-06-13
Description:
Infers a topology of relationships between different datasets, such as multi-omics and phenotypic data recorded on the same samples. We based this methodology on the RV coefficient (Robert & Escoufier, 1976, ), a measure of matrix correlation, which we have extended for partial matrix correlations and binary data (Aben et al., 2018, ).
How to cite:
Nanne Aben (2018). iTOP: Inferring the Topology of Omics Data. R package version 1.0.2, https://cran.r-project.org/web/packages/iTOP
Previous versions and publish date:
1.0.0 (2018-03-22 13:04), 1.0.1 (2018-04-04 15:11)
Other packages that cited iTOP R package
View iTOP citation profile
Other R packages that iTOP depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

rdbnomics  
Download DBnomics Data
R access to hundreds of millions data series from DBnomics API (). ...
Download / Learn more Package Citations See dependency  
critpath  
Setting the Critical Path in Project Management
Solving the problem of project management using CPM (Critical Path Method), PERT (Program Evaluation ...
Download / Learn more Package Citations See dependency  
steepness  
Testing Steepness of Dominance Hierarchies
The steepness package computes steepness as a property of dominance hierarchies. Steepness is define ...
Download / Learn more Package Citations See dependency  
ftaproxim  
Fault Tree Analysis Based on Proxel Simulation
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
mistral  
Methods in Structural Reliability
Various reliability analysis methods for rare event inference (computing failure probability and qua ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns