Other packages > Find by keyword >

iCAMP  

Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis
View on CRAN: Click here


Download and install iCAMP package within the R console
Install from CRAN:
install.packages("iCAMP")

Install from Github:
library("remotes")
install_github("cran/iCAMP")

Install by package version:
library("remotes")
install_version("iCAMP", "1.5.12")



Attach the package and use:
library("iCAMP")
Maintained by
Daliang Ning
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-09-09
Latest Update: 2022-06-01
Description:
To implement a general framework to quantitatively infer Community Assembly Mechanisms by Phylogenetic-bin-based null model analysis, abbreviated as 'iCAMP' (Ning et al 2020) . It can quantitatively assess the relative importance of different community assembly processes, such as selection, dispersal, and drift, for both communities and each phylogenetic group ('bin'). Each bin usually consists of different taxa from a family or an order. The package also provides functions to implement some other published methods, including neutral taxa percentage (Burns et al 2016) based on neutral theory model and quantifying assembly processes based on entire-community null models ('QPEN', Stegen et al 2013) . It also includes some handy functions, particularly for big datasets, such as phylogenetic and taxonomic null model analysis at both community and bin levels, between-taxa niche difference and phylogenetic distance calculation, phylogenetic signal test within phylogenetic groups, midpoint root of big trees, etc. Version 1.3.x mainly improved the function for 'QPEN' and added function 'icamp.cate()' to summarize 'iCAMP' results for different categories of taxa (e.g. core versus rare taxa).
How to cite:
Daliang Ning (2020). iCAMP: Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis. R package version 1.5.12, https://cran.r-project.org/web/packages/iCAMP. Accessed 25 Jun. 2026.
Previous versions and publish date:
1.2.8 (2020-09-09 11:50), 1.2.9 (2020-09-19 23:10), 1.3.4 (2021-01-09 07:30)
Other packages that cited iCAMP R package
View iCAMP citation profile
Other R packages that iCAMP depends, imports, suggests or enhances
Complete documentation for iCAMP
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
edeaR  
Exploratory and Descriptive Event-Based Data Analysis
Exploratory and descriptive analysis of event based data. Provides methods for describing and select ...
Download / Learn more Package Citations See dependency  
airGRiwrm  
'airGR' Integrated Water Resource Management
Semi-distributed Precipitation-Runoff Modelling based on 'airGR' package models integrating human i ...
Download / Learn more Package Citations See dependency  
sitmo  
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
Provided within are two high quality and fast PPRNGs that may be used in an 'OpenMP' parallel enviro ...
Download / Learn more Package Citations See dependency  
foster  
Forest Structure Extrapolation with R
Set of tools to streamline the modeling of the relationship betweensatellite imagery time series or ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA