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iC10  

A Copy Number and Expression-Based Classifier for Breast Tumours
View on CRAN: Click here


Download and install iC10 package within the R console
Install from CRAN:
install.packages("iC10")

Install from Github:
library("remotes")
install_github("cran/iC10")

Install by package version:
library("remotes")
install_version("iC10", "2.0.2")



Attach the package and use:
library("iC10")
Maintained by
Oscar M Rueda
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-06-18
Latest Update: 2019-02-08
Description:
Implementation of the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group.
How to cite:
Oscar M Rueda (2014). iC10: A Copy Number and Expression-Based Classifier for Breast Tumours. R package version 2.0.2, https://cran.r-project.org/web/packages/iC10. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0.1 (2014-06-18 18:52), 1.0.2 (2014-06-19 18:14), 1.1.1 (2014-09-26 12:13), 1.1.2 (2014-12-08 22:25), 1.1.3 (2015-09-23 08:05), 1.4.1 (2018-08-20 16:00), 1.4.2 (2018-08-21 09:50), 1.5 (2019-02-08 11:13)
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