Other packages > Find by keyword >

iC10  

A Copy Number and Expression-Based Classifier for Breast Tumours
View on CRAN: Click here


Download and install iC10 package within the R console
Install from CRAN:
install.packages("iC10")

Install from Github:
library("remotes")
install_github("cran/iC10")

Install by package version:
library("remotes")
install_version("iC10", "1.5")



Attach the package and use:
library("iC10")
Maintained by
Oscar M. Rueda
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-06-18
Latest Update: 2019-02-08
Description:
Implementation of the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group.
How to cite:
Oscar M. Rueda (2014). iC10: A Copy Number and Expression-Based Classifier for Breast Tumours. R package version 1.5, https://cran.r-project.org/web/packages/iC10
Previous versions and publish date:
1.0.1 (2014-06-18 18:52), 1.0.2 (2014-06-19 18:14), 1.1.1 (2014-09-26 12:13), 1.1.2 (2014-12-08 22:25), 1.1.3 (2015-09-23 08:05), 1.4.1 (2018-08-20 16:00), 1.4.2 (2018-08-21 09:50)
Other packages that cited iC10 R package
View iC10 citation profile
Other R packages that iC10 depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

trapezoid  
The Trapezoidal Distribution
The trapezoid package provides 'dtrapezoid', 'ptrapezoid', 'qtrapezoid', and 'rtrapezoid' functions ...
Download / Learn more Package Citations See dependency  
gmt  
Interface Between GMT Map-Making Software and R
Interface between the GMT map-making software and R, enabling the user to manipulate geographic dat ...
Download / Learn more Package Citations See dependency  
hydropeak  
Detect and Characterize Sub-Daily Flow Fluctuations
An important environmental impact on running water ecosystems is caused by hydropeaking - the disco ...
Download / Learn more Package Citations See dependency  
rankdist  
Distance Based Ranking Models
Implements distance based probability models for ranking data. The supported distance metrics inclu ...
Download / Learn more Package Citations See dependency  
EasyDescribe  
A Convenient Way of Descriptive Statistics
Descriptive Statistics is essential for publishing articles. This package can perform descriptive s ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

22,187

R Packages

188,753

Dependencies

55,244

Author Associations

22,188

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns