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hwep  

Hardy-Weinberg Equilibrium in Polyploids
View on CRAN: Click here


Download and install hwep package within the R console
Install from CRAN:
install.packages("hwep")

Install from Github:
library("remotes")
install_github("cran/hwep")

Install by package version:
library("remotes")
install_version("hwep", "2.0.2")



Attach the package and use:
library("hwep")
Maintained by
David Gerard
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-09-28
Latest Update: 2023-05-16
Description:
Inference concerning equilibrium and random mating in autopolyploids. Methods are available to test for equilibrium and random mating at any even ploidy level (>2) in the presence of double reduction at biallelic loci. For autopolyploid populations in equilibrium, methods are available to estimate the degree of double reduction. We also provide functions to calculate genotype frequencies at equilibrium, or after one or several rounds of random mating, given rates of double reduction. The main function is hwefit(). This material is based upon work supported by the National Science Foundation under Grant No. 2132247. The opinions, findings, and conclusions or recommendations expressed are those of the author and do not necessarily reflect the views of the National Science Foundation. For details of these methods, see Gerard (2022a) and Gerard (2022b) .
How to cite:
David Gerard (2021). hwep: Hardy-Weinberg Equilibrium in Polyploids. R package version 2.0.2, https://cran.r-project.org/web/packages/hwep
Previous versions and publish date:
0.0.1 (2021-09-28 12:30), 0.0.2 (2022-05-02 16:00), 2.0.0 (2022-08-16 09:20), 2.0.1 (2023-03-15 17:40)
Other packages that cited hwep R package
View hwep citation profile
Other R packages that hwep depends, imports, suggests or enhances
Functions, R codes and Examples using the hwep R package
Some associated functions: all_multinom . ddirmult . dgamete . drbounds . f1dr . freqnext . gibbs_gl . gibbs_gl_alt . gibbs_known . gsegmat . gsegmat_symb . hweboot . hwefit . hwefreq . hwelike . hwenodr . hwep-package . hweustat . menbayesgl . p_from_alpha . qqpvalue . rmbayes . rmbayesgl . rmlike . simgl . ts_bands . zsegarray . zygdist . 
Some associated R codes: RcppExports.R . bayes.R . boot.R . f1dr.R . gmm.R . grad.R . hwe.R . hwep-package.R . like.R . multi.R . nodr.R . plots.R . seg.R . stanmodels.R . tetra.R . theo.R . ustat.R . utils.R .  Full hwep package functions and examples
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