Other packages > Find by keyword >

huge  

High-Dimensional Undirected Graph Estimation
View on CRAN: Click here


Download and install huge package within the R console
Install from CRAN:
install.packages("huge")

Install from Github:
library("remotes")
install_github("cran/huge")

Install by package version:
library("remotes")
install_version("huge", "1.3.5")



Attach the package and use:
library("huge")
Maintained by
Haoming Jiang
[Scholar Profile | Author Map]
First Published: 2010-11-11
Latest Update: 2021-06-30
Description:
Provides a general framework for high-dimensional undirected graph estimation. It integrates data preprocessing, neighborhood screening, graph estimation, and model selection techniques into a pipeline. In preprocessing stage, the nonparanormal(npn) transformation is applied to help relax the normality assumption. In the graph estimation stage, the graph structure is estimated by Meinshausen-Buhlmann graph estimation or the graphical lasso, and both methods can be further accelerated by the lossy screening rule preselecting the neighborhood of each variable by correlation thresholding. We target on high-dimensional data analysis usually d >> n, and the computation is memory-optimized using the sparse matrix output. We also provide a computationally efficient approach, correlation thresholding graph estimation. Three regularization/thresholding parameter selection methods are included in this package: (1)stability approach for regularization selection (2) rotation information criterion (3) extended Bayesian information criterion which is only available for the graphical lasso.
How to cite:
Haoming Jiang (2010). huge: High-Dimensional Undirected Graph Estimation. R package version 1.3.5, https://cran.r-project.org/web/packages/huge. Accessed 08 Apr. 2025.
Previous versions and publish date:
0.7 (2010-11-11 13:40), 0.8.1 (2010-11-17 09:17), 0.8 (2010-11-14 09:42), 0.9.1 (2011-02-13 17:11), 0.9 (2010-11-22 08:50), 1.0.1 (2011-04-11 08:36), 1.0.2 (2011-06-15 20:02), 1.0.3 (2011-06-17 08:45), 1.0 (2011-03-02 18:32), 1.1.0 (2011-07-23 15:55), 1.1.1 (2011-08-10 18:27), 1.1.2 (2011-08-22 21:47), 1.2.1 (2012-01-27 12:03), 1.2.2 (2012-03-21 08:59), 1.2.3 (2012-03-22 09:26), 1.2.4 (2012-08-16 07:52), 1.2.5 (2013-12-07 07:49), 1.2.6 (2014-02-28 07:00), 1.2.7 (2015-09-16 10:05), 1.2 (2012-01-22 21:25), 1.3.0 (2019-02-22 08:00), 1.3.1 (2019-03-12 00:00), 1.3.2 (2019-04-08 14:10), 1.3.3 (2019-09-09 23:00), 1.3.4.1 (2020-04-01 07:40), 1.3.4 (2019-10-28 16:10)
Other packages that cited huge R package
View huge citation profile
Other R packages that huge depends, imports, suggests or enhances
Complete documentation for huge
Downloads during the last 30 days
03/0903/1003/1103/1203/1303/1403/1503/1603/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/2703/2803/2903/3003/3104/0104/0204/0304/0404/0504/06Downloads for huge20406080100120140160180200220TrendBars

Today's Hot Picks in Authors and Packages

ssc  
Semi-Supervised Classification Methods
Provides a collection of self-labeled techniques for semi-supervised classification. In semi-superv ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
sybil  
Efficient Constrained Based Modelling
This Systems Biology Package Gelius-Dietrich et. al. 2012 doi10.11861752-0509-7-125 implements algor ...
Download / Learn more Package Citations See dependency  
dave  
Functions for "Data Analysis in Vegetation Ecology"
A collection of functions accompanying the book "Data Analysis in Vegetation Ecology". 3rd ed. CABI, ...
Download / Learn more Package Citations See dependency  
seasonalclumped  
Toolbox for Clumped Isotope Seasonality Reconstructions
Compiles a set of functions and dummy data that simplify reconstructions of seasonal temperature va ...
Download / Learn more Package Citations See dependency  
icr  
Compute Krippendorff's Alpha
Provides functions to compute and plot Krippendorff's inter-coder reliability coefficient alpha and ...
Download / Learn more Package Citations See dependency  

24,012

R Packages

207,311

Dependencies

64,867

Author Associations

24,013

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA