R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
hilldiv
View on CRAN: Click
here
Download and install hilldiv package within the R console
Install from CRAN:
install.packages("hilldiv")
Install from Github:
library("remotes")
install_github("cran/hilldiv")
Install by package version:
library("remotes")
install_version("hilldiv", "1.5.1")
Attach the package and use:
library("hilldiv")
Maintained by
Antton Alberdi
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-10-01
Latest Update: 2019-10-01
Description:
Tools for analysing, comparing, visualising and partitioning diversity based on Hill numbers.
'hilldiv' is an R package that provides a set of functions to assist analysis of diversity for
diet reconstruction, microbial community profiling or more general ecosystem characterisation
analyses based on Hill numbers, using OTU/ASV tables and associated phylogenetic trees as
inputs. The package includes functions for (phylo)diversity measurement, (phylo)diversity
profile plotting, (phylo)diversity comparison between samples and groups, (phylo)diversity
partitioning and (dis)similarity measurement. All of these grounded in abundance-based and
incidence-based Hill numbers.
The statistical framework developed around Hill numbers encompasses many of the most
broadly employed diversity (e.g. richness, Shannon index, Simpson index),
phylogenetic diversity (e.g. Faith's PD, Allen's H, Rao's quadratic entropy) and
dissimilarity (e.g. Sorensen index, Unifrac distances) metrics. This enables the most
common analyses of diversity to be performed while grounded in a single statistical
framework. The methods are described in Jost et al. (2007) ,
Chao et al. (2010) and Chiu et al. (2014)
; and reviewed in the framework of molecularly characterised
biological systems in Alberdi & Gilbert (2019) .
How to cite:
Antton Alberdi (2019). hilldiv: Integral Analysis of Diversity Based on Hill Numbers. R package version 1.5.1, https://cran.r-project.org/web/packages/hilldiv. Accessed 22 Dec. 2024.
Previous versions and publish date:
No previous versions
Other packages that cited hilldiv R package
View hilldiv citation profile
Other R packages that hilldiv depends,
imports, suggests or enhances
Complete documentation for hilldiv
Functions, R codes and Examples using
the hilldiv R package
Some associated functions: CqN . SqN . UqN . VqN . alpha_div . bat.diet.hierarchy . bat.diet.otutable . bat.diet.tree . beta_dis . copy_filt . depth_cov . depth_filt . div_part . div_profile . div_profile_plot . div_test . div_test_plot . gamma_div . hill_div . index_div . is.nested . match_data . pair_dis . pair_dis_plot . to.incidence . tree_depth . tss .
Some associated R codes: CqN.R . SqN.R . UqN.R . VqN.R . alpha_div.R . beta_dis.R . copy_filt.R . data.R . depth_cov.R . depth_filt.R . div_part.R . div_profile.R . div_profile_plot.R . div_test.R . div_test_plot.R . gamma_div.R . hill_div.R . index_div.R . is.nested.R . match_data.R . pair_dis.R . pair_dis_plot.R . to.incidence.R . tree_depth.R . tss.R . Full hilldiv package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by
helping add
Reviews / comments / questions /suggestions ↴↴↴
Today's Hot Picks in Authors and Packages
composits
A compositional multivariate and univariate time series outlier ensemble.It uses the four R packages ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Sevvandi Kandanaarachchi (view profile)
wordspace
An interactive laboratory for research on distributional semantic models ('DSM', see < ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Stephanie Evert (view profile)
dmlalg
Implementation of double machine learning (DML) algorithms in R,
based on Emmenegger and Buehlmann ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Corinne Emmenegger (view profile)
elect
Functions to compute state-specific and marginal life expectancies. The computation is based on a fi ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Ardo van den Hout (view profile)
Rfast2
A collection of fast statistical and utility functions for data analysis. Functions for regression, ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Manos Papadakis (view profile)
LOGANTree
Enables researchers to model log-file data from computer-based assessments using machine-learning te ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Qi Qin (view profile)