Other packages > Find by keyword >

hicream  

HIC diffeREntial Analysis Method
View on CRAN: Click here


Download and install hicream package within the R console
Install from CRAN:
install.packages("hicream")

Install from Github:
library("remotes")
install_github("cran/hicream")

Install by package version:
library("remotes")
install_version("hicream", "0.0.3")



Attach the package and use:
library("hicream")
Maintained by
Elise Jorge
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-07-25
Latest Update: 2025-07-25
Description:
Perform Hi-C data differential analysis based on pixel-level differential analysis and a post hoc inference strategy to quantify signal in clusters of pixels. Clusters of pixels are obtained through a connectivity-constrained two-dimensional hierarchical clustering.
How to cite:
Elise Jorge (2025). hicream: HIC diffeREntial Analysis Method. R package version 0.0.3, https://cran.r-project.org/web/packages/hicream. Accessed 05 Jun. 2026.
Previous versions and publish date:
0.0.1 (2025-07-25 17:40), 0.0.2 (2025-11-19 18:20), 0.0.3 (2026-01-12 15:10)
Other packages that cited hicream R package
View hicream citation profile
Other R packages that hicream depends, imports, suggests or enhances
Complete documentation for hicream
Functions, R codes and Examples using the hicream R package
Full hicream package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

msm  
Multi-State Markov and Hidden Markov Models in Continuous Time
Functions for fitting continuous-time Markov and hidden Markov multi-state models to longitudinal d ...
Download / Learn more Package Citations See dependency  
crossurr  
Cross-Fitting for Doubly Robust Evaluation of High-Dimensional Surrogate Markers
Doubly robust methods for evaluating surrogate markers as outlined in: Agniel D, Hejblum BP, Thiebau ...
Download / Learn more Package Citations See dependency  
envirem  
Generation of ENVIREM Variables
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables. ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
ibb  
R Wrapper for Istanbul Municipality Open Data Portal
Call wrappers for Istanbul Metropolitan Municipality's Open Data Portal (Turkish: Istanbul B ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA