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hacksig  

A Tidy Framework to Hack Gene Expression Signatures
View on CRAN: Click here


Download and install hacksig package within the R console
Install from CRAN:
install.packages("hacksig")

Install from Github:
library("remotes")
install_github("cran/hacksig")

Install by package version:
library("remotes")
install_version("hacksig", "0.1.2")



Attach the package and use:
library("hacksig")
Maintained by
Andrea Carenzo
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-12-02
Latest Update: 2022-02-17
Description:
A collection of cancer transcriptomics gene signatures as well as a simple and tidy interface to compute single sample enrichment scores either with the original procedure or with three alternatives: the "combined z-score" of Lee et al. (2008) , the "single sample GSEA" of Barbie et al. (2009) and the "singscore" of Foroutan et al. (2018) . The 'get_sig_info()' function can be used to retrieve information about each signature implemented.
How to cite:
Andrea Carenzo (2021). hacksig: A Tidy Framework to Hack Gene Expression Signatures. R package version 0.1.2, https://cran.r-project.org/web/packages/hacksig. Accessed 22 Dec. 2024.
Previous versions and publish date:
0.1.1 (2021-12-02 09:50)
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