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grantham  

Calculate the 'Grantham' Distance
View on CRAN: Click here


Download and install grantham package within the R console
Install from CRAN:
install.packages("grantham")

Install from Github:
library("remotes")
install_github("cran/grantham")

Install by package version:
library("remotes")
install_version("grantham", "0.1.1")



Attach the package and use:
library("grantham")
Maintained by
Ramiro Magno
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-12-20
Latest Update: 2022-01-07
Description:
A minimal set of routines to calculate the 'Grantham' distance . The 'Grantham' distance attempts to provide a proxy for the evolutionary distance between two amino acids based on three key chemical properties: composition, polarity and molecular volume. In turn, evolutionary distance is used as a proxy for the impact of missense mutations. The higher the distance, the more deleterious the substitution is expected to be.
How to cite:
Ramiro Magno (2021). grantham: Calculate the 'Grantham' Distance. R package version 0.1.1, https://cran.r-project.org/web/packages/grantham
Previous versions and publish date:
0.1.0 (2021-12-20 16:40)
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