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gquad  

Prediction of G Quadruplexes and Other Non-B DNA Motifs
View on CRAN: Click here


Download and install gquad package within the R console
Install from CRAN:
install.packages("gquad")

Install from Github:
library("remotes")
install_github("cran/gquad")

Install by package version:
library("remotes")
install_version("gquad", "2.1-2")



Attach the package and use:
library("gquad")
Maintained by
Hannah O. Ajoge
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-07-01
Latest Update: 2022-11-29
Description:
Genomic biology is not limited to the confines of the canonical B-forming DNA duplex, but includes over ten different types of other secondary structures that are collectively termed non-B DNA structures. Of these non-B DNA structures, the G-quadruplexes are highly stable four-stranded structures that are recognized by distinct subsets of nuclear factors. This package provide functions for predicting intramolecular G quadruplexes. In addition, functions for predicting other intramolecular nonB DNA structures are included.
How to cite:
Hannah O. Ajoge (2015). gquad: Prediction of G Quadruplexes and Other Non-B DNA Motifs. R package version 2.1-2, https://cran.r-project.org/web/packages/gquad
Previous versions and publish date:
1.0-0 (2015-07-01 11:30), 2.0-0 (2017-01-14 13:41), 2.1-0 (2017-03-02 21:06), 2.1-1 (2017-06-07 00:14)
Other packages that cited gquad R package
View gquad citation profile
Other R packages that gquad depends, imports, suggests or enhances
Functions, R codes and Examples using the gquad R package
Some associated functions: aphased . gquad . gquadO . hdna . hdnaO . slipped . str . tfo . zdna . 
Some associated R codes: aphased.R . gquad.R . gquadO.R . hdna.R . hdnaO.R . slipped.R . str.R . tfo.R . zdna.R .  Full gquad package functions and examples
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