Other packages > Find by keyword >

gprofiler2  

Interface to the 'g:Profiler' Toolset
View on CRAN: Click here


Download and install gprofiler2 package within the R console
Install from CRAN:
install.packages("gprofiler2")

Install from Github:
library("remotes")
install_github("cran/gprofiler2")

Install by package version:
library("remotes")
install_version("gprofiler2", "0.2.4")



Attach the package and use:
library("gprofiler2")
Maintained by
Liis Kolberg
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-03-06
Latest Update: 2024-02-23
Description:
A toolset for functional enrichment analysis and visualization, gene/protein/SNP identifier conversion and mapping orthologous genes across species via 'g:Profiler' (). The main tools are: (1) 'g:GOSt' - functional enrichment analysis and visualization of gene lists; (2) 'g:Convert' - gene/protein/transcript identifier conversion across various namespaces; (3) 'g:Orth' - orthology search across species; (4) 'g:SNPense' - mapping SNP rs identifiers to chromosome positions, genes and variant effects. This package is an R interface corresponding to the 2019 update of 'g:Profiler' and provides access to 'g:Profiler' for versions 'e94_eg41_p11' and higher. See the package 'gProfileR' for accessing older versions from the 'g:Profiler' toolset.
How to cite:
Liis Kolberg (2019). gprofiler2: Interface to the 'g:Profiler' Toolset. R package version 0.2.4, https://cran.r-project.org/web/packages/gprofiler2. Accessed 06 Aug. 2026.
Previous versions and publish date:
(2026-07-09 07:45), 0.1.0 (2019-03-06 20:30), 0.1.1 (2019-03-25 20:20), 0.1.2 (2019-04-08 12:20), 0.1.3 (2019-04-23 17:30), 0.1.4 (2019-05-24 14:00), 0.1.5 (2019-07-04 11:00), 0.1.6 (2019-08-26 15:40), 0.1.7 (2019-10-31 18:50), 0.1.8 (2019-12-18 14:40), 0.1.9 (2020-04-23 20:00), 0.2.0 (2020-08-27 15:50), 0.2.1 (2021-08-23 16:00), 0.2.2 (2023-06-14 04:50), 0.2.3 (2024-02-23 22:50)
Other packages that cited gprofiler2 R package
View gprofiler2 citation profile
Other R packages that gprofiler2 depends, imports, suggests or enhances
Complete documentation for gprofiler2
Functions, R codes and Examples using the gprofiler2 R package
Some associated functions: gconvert . get_base_url . get_tls_version . get_user_agent . get_version_info . gorth . gost . gostplot . gsnpense . mapViridis . publish_gostplot . publish_gosttable . random_query . set_base_url . set_tls_version . set_user_agent . upload_GMT_file . 
Some associated R codes: gprofiler2.R .  Full gprofiler2 package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

RRedshiftSQL  
R Interface to the 'Redshift' Database
Superclasses 'PostgreSQL' connection to help enable full 'dplyr' functionality on 'Redshift'. ...
Download / Learn more Package Citations See dependency  
TMDb  
Access to TMDb API
Provides an R-interface to the TMDb API (see TMDb API on < ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
SAMBA  
Selection and Misclassification Bias Adjustment for Logistic Regression Models
Health research using data from electronic health records (EHR) has gained popularity, but miscla ...
Download / Learn more Package Citations See dependency  
lsmeans  
Least-Squares Means
Obtain least-squares means for linear, generalized linear, and mixed models. Compute contrasts or l ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA