R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
gimap
View on CRAN: Click
here
Download and install gimap package within the R console
Install from CRAN:
install.packages("gimap")
Install from Github:
library("remotes")
install_github("cran/gimap") Install by package version:
library("remotes")
install_version("gimap", "1.1.2") Attach the package and use:
library("gimap")
Maintained by
Candace Savonen
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-02-18
Latest Update: 2025-04-30
Description:
Helps find meaningful patterns in complex genetic experiments. First gimap takes data from paired CRISPR (Clustered regularly interspaced short palindromic repeats) screens that has been pre-processed to counts table of paired gRNA (guide Ribonucleic Acid) reads. The input data will have cell counts for how well cells grow (or don't grow) when different genes or pairs of genes are disabled. The output of the 'gimap' package is genetic interaction scores which arethe distance between the observed CRISPR score and the expected CRISPR score. The expected CRISPR scores are what we expect for the CRISPR values to be for two unrelated genes. The further away an observed CRISPR score is from its expected score the more we suspect genetic interaction. The work in this package is based off of original research from the Alice Berger lab at Fred Hutchinson Cancer Center (2021) <doi:10.1016/j.celrep.2021.109597>.
How to cite:
Candace Savonen (2025). gimap: Calculate Genetic Interactions for Paired CRISPR Targets. R package version 1.1.2, https://cran.r-project.org/web/packages/gimap. Accessed 12 Sep. 2026.
Previous versions and publish date:
Other packages that cited gimap R package
View gimap citation profile
Other R packages that gimap depends,
imports, suggests or enhances
Complete documentation for gimap
Functions, R codes and Examples using
the gimap R package
Full gimap package
functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
NScluster
Simulation and estimation for Neyman-Scott spatial cluster point
process models and their extension ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Masami Saga (view profile)
unikn
Define and use graphical elements of corporate design manuals in R. The 'unikn' package provides col ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Hansjoerg Neth (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
mixl
Specification and estimation of multinomial logit
models. Large datasets and complex models are su ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Joseph Molloy (view profile)
qdapTools
A collection of tools associated with the 'qdap' package that may be useful outside of the
context ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Tyler Rinker (view profile)
electionsBR
Offers a set of functions to easily download and clean
Brazilian electoral data from the Superior E ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Denisson Silva (view profile)
28,480
R Packages
239,283
Dependencies
75,677
Author Associations
28,481
Publication Badges
