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ggupset  

Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots
View on CRAN: Click here


Download and install ggupset package within the R console
Install from CRAN:
install.packages("ggupset")

Install from Github:
library("remotes")
install_github("cran/ggupset")

Install by package version:
library("remotes")
install_version("ggupset", "0.4.1")



Attach the package and use:
library("ggupset")
Maintained by
Constantin Ahlmann-Eltze
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-03-06
Latest Update: 2025-02-11
Description:
Replace the standard x-axis in 'ggplots' with a combination matrix to visualize complex set overlaps. 'UpSet' has introduced a new way to visualize the overlap of sets as an alternative to Venn diagrams. This package provides a simple way to produce such plots using 'ggplot2'. In addition it can convert any categorical axis into a combination matrix axis.
How to cite:
Constantin Ahlmann-Eltze (2019). ggupset: Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots. R package version 0.4.1, https://cran.r-project.org/web/packages/ggupset. Accessed 06 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:44), 0.1.0 (2019-03-06 14:30), 0.2.0 (2020-03-25 14:50), 0.2.1 (2020-03-30 01:00), 0.3.0 (2020-05-05 12:40), 0.4.0 (2024-06-24 12:10)
Other packages that cited ggupset R package
View ggupset citation profile
Other R packages that ggupset depends, imports, suggests or enhances
Complete documentation for ggupset
Functions, R codes and Examples using the ggupset R package
Some associated functions: axis_combmatrix . df_complex_conditions . gene_pathway_membership . scale_x_mergelist . scale_x_upset . theme_combmatrix . tidy_movies . 
Some associated R codes: axis_combmatrix.R . data.R . scale_upset.R . theme_combmatrix.R .  Full ggupset package functions and examples
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