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ggcoverage  

Visualize Genome Coverage with Various Annotations
View on CRAN: Click here


Download and install ggcoverage package within the R console
Install from CRAN:
install.packages("ggcoverage")

Install from Github:
library("remotes")
install_github("cran/ggcoverage")

Install by package version:
library("remotes")
install_version("ggcoverage", "0.7.1")



Attach the package and use:
library("ggcoverage")
Maintained by
Yabing Song
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-08-18
Latest Update: 2022-09-06
Description:
The goal of 'ggcoverage' is to simplify the process of visualizing genome coverage. It contains functions to load data from BAM, BigWig or BedGraph files, create genome coverage plot, add various annotations to the coverage plot, including base and amino acid annotation, GC annotation, gene annotation, transcript annotation, ideogram annotation and peak annotation.
How to cite:
Yabing Song (2022). ggcoverage: Visualize Genome Coverage with Various Annotations. R package version 0.7.1, https://cran.r-project.org/web/packages/ggcoverage. Accessed 19 Apr. 2025.
Previous versions and publish date:
0.7.0 (2022-08-18 09:20), 0.7.1 (2022-09-06 04:50)
Other packages that cited ggcoverage R package
View ggcoverage citation profile
Other R packages that ggcoverage depends, imports, suggests or enhances
Downloads during the last 30 days
03/2503/2804/0404/0704/08Downloads for ggcoverage11.522.533.54TrendBars

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