Other packages > Find by keyword >

ggcoverage  

Visualize Genome Coverage with Various Annotations
View on CRAN: Click here


Download and install ggcoverage package within the R console
Install from CRAN:
install.packages("ggcoverage")

Install from Github:
library("remotes")
install_github("cran/ggcoverage")

Install by package version:
library("remotes")
install_version("ggcoverage", "0.7.1")



Attach the package and use:
library("ggcoverage")
Maintained by
Yabing Song
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-08-18
Latest Update:
Description:
The goal of 'ggcoverage' is to simplify the process of visualizing genome coverage. It contains functions to load data from BAM, BigWig or BedGraph files, create genome coverage plot, add various annotations to the coverage plot, including base and amino acid annotation, GC annotation, gene annotation, transcript annotation, ideogram annotation and peak annotation.
How to cite:
Yabing Song (2022). ggcoverage: Visualize Genome Coverage with Various Annotations. R package version 0.7.1, https://cran.r-project.org/web/packages/ggcoverage. Accessed 22 Sep. 2026.
Previous versions and publish date:
(2026-07-09 07:43), 0.7.0 (2022-08-18 09:20), 0.7.1 (2022-09-06 04:50)
Other packages that cited ggcoverage R package
View ggcoverage citation profile
Other R packages that ggcoverage depends, imports, suggests or enhances
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

Countr  
Flexible Univariate Count Models Based on Renewal Processes
Flexible univariate count models based on renewal processes. The models may include covariates and ...
Download / Learn more Package Citations See dependency  
odns  
Access Scottish Health and Social Care Open Data
Allows potential users of Scottish Health and Social Care Open Data ( ...
Download / Learn more Package Citations See dependency  
heatmaply  
Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'
Create interactive cluster 'heatmaps' that can be saved as a stand- alone HTML file, embedded in 'R ...
Download / Learn more Package Citations See dependency  
spider  
Species Identity and Evolution in R
Analysis of species limits and DNA barcoding data. Included are functions for generating important s ...
Download / Learn more Package Citations See dependency  
jointseg  
Joint Segmentation of Multivariate (Copy Number) Signals
Methods for fast segmentation of multivariate signals into piecewise constant profiles and for gene ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

28,720

R Packages

247,686

Dependencies

75,677

Author Associations

28,721

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA