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genieBPC  

Project GENIE BioPharma Collaborative Data Processing Pipeline
View on CRAN: Click here


Download and install genieBPC package within the R console
Install from CRAN:
install.packages("genieBPC")

Install from Github:
library("remotes")
install_github("cran/genieBPC")

Install by package version:
library("remotes")
install_version("genieBPC", "2.0.1")



Attach the package and use:
library("genieBPC")
Maintained by
Jessica A. Lavery
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-08-14
Latest Update: 2023-03-03
Description:
The American Association Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) BioPharma Collaborative represents a multi-year, multi-institution effort to build a pan-cancer repository of linked clinico-genomic data. The genomic and clinical data are provided in multiple releases (separate releases for each cancer cohort with updates following data corrections), which are stored on the data sharing platform 'Synapse' . The 'genieBPC' package provides a seamless way to obtain the data corresponding to each release from 'Synapse' and to prepare datasets for analysis.
How to cite:
Jessica A. Lavery (2022). genieBPC: Project GENIE BioPharma Collaborative Data Processing Pipeline. R package version 2.0.1, https://cran.r-project.org/web/packages/genieBPC. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0.0 (2022-08-14 09:30), 1.0.1 (2022-10-27 16:45), 1.1.0 (2023-03-03 11:30), 1.1.1 (2024-03-29 18:50)
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Complete documentation for genieBPC
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