Other packages > Find by keyword >

genieBPC  

Project GENIE BioPharma Collaborative Data Processing Pipeline
View on CRAN: Click here


Download and install genieBPC package within the R console
Install from CRAN:
install.packages("genieBPC")

Install from Github:
library("remotes")
install_github("cran/genieBPC")

Install by package version:
library("remotes")
install_version("genieBPC", "2.0.1")



Attach the package and use:
library("genieBPC")
Maintained by
Jessica A. Lavery
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-08-14
Latest Update: 2024-07-11
Description:
The American Association Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) BioPharma Collaborative represents a multi-year, multi-institution effort to build a pan-cancer repository of linked clinico-genomic data. The genomic and clinical data are provided in multiple releases (separate releases for each cancer cohort with updates following data corrections), which are stored on the data sharing platform 'Synapse' . The 'genieBPC' package provides a seamless way to obtain the data corresponding to each release from 'Synapse' and to prepare datasets for analysis.
How to cite:
Jessica A. Lavery (2022). genieBPC: Project GENIE BioPharma Collaborative Data Processing Pipeline. R package version 2.0.1, https://cran.r-project.org/web/packages/genieBPC. Accessed 06 Mar. 2026.
Previous versions and publish date:
1.0.0 (2022-08-14 09:30), 1.0.1 (2022-10-27 16:45), 1.1.0 (2023-03-03 11:30), 1.1.1 (2024-03-29 18:50)
Other packages that cited genieBPC R package
View genieBPC citation profile
Other R packages that genieBPC depends, imports, suggests or enhances
Complete documentation for genieBPC
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

openxlsx  
Read, Write and Edit xlsx Files
Simplifies the creation of Excel .xlsx files by providing a high level interface to writing, stylin ...
Download / Learn more Package Citations See dependency  
mlr3viz  
Visualizations for 'mlr3'
Visualization package of the 'mlr3' ecosystem. It features plots for mlr3 objects such as tasks, le ...
Download / Learn more Package Citations See dependency  
DatabionicSwarm  
Swarm Intelligence for Self-Organized Clustering
Algorithms implementing populations of agents that interact with one another and sense their environ ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
EMVS  
The Expectation-Maximization Approach to Bayesian Variable Selection
An efficient expectation-maximization algorithm for fitting Bayesian spike-and-slab regularization p ...
Download / Learn more Package Citations See dependency  
solitude  
An Implementation of Isolation Forest
Isolation forest is anomaly detection method introduced by the paper Isolation based Anomaly Detecti ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,244

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA