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geneNR  

Automated Gene Identification for Post-GWAS and QTL Analysis
View on CRAN: Click here


Download and install geneNR package within the R console
Install from CRAN:
install.packages("geneNR")

Install from Github:
library("remotes")
install_github("cran/geneNR")

Install by package version:
library("remotes")
install_version("geneNR", "2.0.1")



Attach the package and use:
library("geneNR")
Maintained by
Rajamani Nirmalaruban
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-03-10
Latest Update: 2025-03-29
Description:
Facilitates the post-Genome Wide Association Studies (GWAS) and Quantitative Trait Loci (QTL) analysis of identifying candidate genes within user-defined search window, based on the identified Single Nucleotide Polymorphisms (SNPs) as given by Mazumder AK (2024) <doi:10.1038/s41598-024-66903-3>. It supports candidate gene analysis for wheat and rice. Just import your GWAS result as explained in the sample_data file and the function does all the manual search and retrieve candidate genes for you, while exporting the results into ready-to-use output.
How to cite:
Rajamani Nirmalaruban (2025). geneNR: Automated Gene Identification for Post-GWAS and QTL Analysis. R package version 2.0.1, https://cran.r-project.org/web/packages/geneNR. Accessed 09 Mar. 2026.
Previous versions and publish date:
1.0.1 (2025-03-10 15:50)
Other packages that cited geneNR R package
View geneNR citation profile
Other R packages that geneNR depends, imports, suggests or enhances
Complete documentation for geneNR
Functions, R codes and Examples using the geneNR R package
Full geneNR package functions and examples
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