Other packages > Find by keyword >

geneNR  

Automated Gene Identification for Post-GWAS and QTL Analysis
View on CRAN: Click here


Download and install geneNR package within the R console
Install from CRAN:
install.packages("geneNR")

Install from Github:
library("remotes")
install_github("cran/geneNR")

Install by package version:
library("remotes")
install_version("geneNR", "3.0.0")



Attach the package and use:
library("geneNR")
Maintained by
Rajamani Nirmalaruban
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-03-10
Latest Update: 2025-03-29
Description:
Facilitates the post-Genome Wide Association Studies (GWAS) and Quantitative Trait Loci (QTL) analysis of identifying candidate genes within user-defined search window, based on the identified Single Nucleotide Polymorphisms (SNPs) as given by Mazumder AK (2024) <doi:10.1038/s41598-024-66903-3>. It supports candidate gene analysis for wheat and rice. Just import your GWAS result as explained in the sample_data file and the function does all the manual search and retrieve candidate genes for you, while exporting the results into ready-to-use output.
How to cite:
Rajamani Nirmalaruban (2025). geneNR: Automated Gene Identification for Post-GWAS and QTL Analysis. R package version 3.0.0, https://cran.r-project.org/web/packages/geneNR. Accessed 25 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:41), 1.0.1 (2025-03-10 15:50), 2.0.1 (2025-03-29 17:50)
Other packages that cited geneNR R package
View geneNR citation profile
Other R packages that geneNR depends, imports, suggests or enhances
Complete documentation for geneNR
Functions, R codes and Examples using the geneNR R package
Full geneNR package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

guardianapi  
Access 'The Guardian' Newspaper Open Data API
Access to 'The Guardian' newspaper's open API , containing ...
Download / Learn more Package Citations See dependency  
imputeTS  
Time Series Missing Value Imputation
Imputation (replacement) of missing values in univariate time series. Offers several imputation fu ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
nlstools  
Tools for Nonlinear Regression Analysis
Several tools for assessing the quality of fit of a gaussian nonlinear model are provided. ...
Download / Learn more Package Citations See dependency  
RcmdrPlugin.aRnova  
R Commander Plug-in for Repeated-Measures ANOVA
R Commander plug-in for repeated-measures and mixed-design ('split-plot') ANOVA. It adds a new men ...
Download / Learn more Package Citations See dependency  
fstcore  
R Bindings to the 'Fstlib' Library
The 'fstlib' library provides multithreaded serialization of compressed data frames using the 'fst' ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,081

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA