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geneHummus  

A Pipeline to Define Gene Families in Legumes and Beyond
View on CRAN: Click here


Download and install geneHummus package within the R console
Install from CRAN:
install.packages("geneHummus")

Install from Github:
library("remotes")
install_github("cran/geneHummus")

Install by package version:
library("remotes")
install_version("geneHummus", "1.0.11")



Attach the package and use:
library("geneHummus")
Maintained by
Jose V. Die
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-03-25
Latest Update: 2019-04-04
Description:
A pipeline with high specificity and sensitivity in extracting proteins from the RefSeq database (National Center for Biotechnology Information). Manual identification of gene families is highly time-consuming and laborious, requiring an iterative process of manual and computational analysis to identify members of a given family. The pipelines implements an automatic approach for the identification of gene families based on the conserved domains that specifically define that family. See Die et al. (2018) for more information and examples.
How to cite:
Jose V. Die (2019). geneHummus: A Pipeline to Define Gene Families in Legumes and Beyond. R package version 1.0.11, https://cran.r-project.org/web/packages/geneHummus. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0.0 (2019-03-25 10:10), 1.0.1 (2019-03-26 16:20)
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Complete documentation for geneHummus
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