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gbifdb  

High Performance Interface to 'GBIF'
View on CRAN: Click here


Download and install gbifdb package within the R console
Install from CRAN:
install.packages("gbifdb")

Install from Github:
library("remotes")
install_github("cran/gbifdb")

Install by package version:
library("remotes")
install_version("gbifdb", "1.0.0")



Attach the package and use:
library("gbifdb")
Maintained by
Carl Boettiger
[Scholar Profile | Author Map]
First Published: 2022-05-21
Latest Update: 2023-10-19
Description:
A high performance interface to the Global Biodiversity Information Facility, 'GBIF'. In contrast to 'rgbif', which can access small subsets of 'GBIF' data through web-based queries to a central server, 'gbifdb' provides enhanced performance for R users performing large-scale analyses on servers and cloud computing providers, providing full support for arbitrary 'SQL' or 'dplyr' operations on the complete 'GBIF' data tables (now over 1 billion records, and over a terabyte in size). 'gbifdb' accesses a copy of the 'GBIF' data in 'parquet' format, which is already readily available in commercial computing clouds such as the Amazon Open Data portal and the Microsoft Planetary Computer, or can be accessed directly without downloading, or downloaded to any server with suitable bandwidth and storage space. The high-performance techniques for local and remote access are described in and respectively.
How to cite:
Carl Boettiger (2022). gbifdb: High Performance Interface to 'GBIF'. R package version 1.0.0, https://cran.r-project.org/web/packages/gbifdb. Accessed 20 Feb. 2025.
Previous versions and publish date:
0.1.2 (2022-05-21 17:10)
Other packages that cited gbifdb R package
View gbifdb citation profile
Other R packages that gbifdb depends, imports, suggests or enhances
Complete documentation for gbifdb
Functions, R codes and Examples using the gbifdb R package
Some associated functions: gbif_dir . gbif_download . gbif_example_data . gbif_local . gbif_remote . gbif_version . gbifdb-package . 
Some associated R codes: gbif_dir.R . gbif_download.R . gbif_example_data.R . gbif_local.R . gbif_remote.R . gbif_version.R . gbifdb-package.R .  Full gbifdb package functions and examples
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