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gRaphiaExtra  

An R Package for Integrating 'Seurat' Objects into 'gRaphia'
View on CRAN: Click here


Download and install gRaphiaExtra package within the R console
Install from CRAN:
install.packages("gRaphiaExtra")

Install from Github:
library("remotes")
install_github("cran/gRaphiaExtra")

Install by package version:
library("remotes")
install_version("gRaphiaExtra", "0.26.9")



Attach the package and use:
library("gRaphiaExtra")
Maintained by
Nilabhra R Das
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-09-18
Latest Update: 2026-09-18
Description:
Utilising graph-based network analysis frameworks, 'Graphia' <https://graphia.app/> is a powerful open source visual analytics application developed to aid the interpretation of large and complex datasets. For more details, see article by Freeman et al. (2022) <doi:10.1371/journal.pcbi.1010310>. 'gRaphia' is an extension of the 'Graphia' applicationwithin the R environment, providing tools for network analysis and visualisation. 'gRaphiaExtra' provides additional functionality specifically designed for single-cell RNA-sequencing data, enabling users to seamlessly integrate and utilise existing 'Seurat' analysis outputs in 'gRaphia'. The package also provides supplementary functions to support and enhance the 'gRaphia' analysis framework.
How to cite:
Nilabhra R Das (2026). gRaphiaExtra: An R Package for Integrating 'Seurat' Objects into 'gRaphia'. R package version 0.26.9, https://cran.r-project.org/web/packages/gRaphiaExtra. Accessed 25 Oct. 2026.
Previous versions and publish date:
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Complete documentation for gRaphiaExtra
Functions, R codes and Examples using the gRaphiaExtra R package
Full gRaphiaExtra package functions and examples
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