Other packages > Find by keyword >

funMoDisco  

Motif Discovery in Functional Data
View on CRAN: Click here


Download and install funMoDisco package within the R console
Install from CRAN:
install.packages("funMoDisco")

Install from Github:
library("remotes")
install_github("cran/funMoDisco")

Install by package version:
library("remotes")
install_version("funMoDisco", "1.1.0")



Attach the package and use:
library("funMoDisco")
Maintained by
Jacopo Di Iorio
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-04-15
Latest Update: 2025-04-15
Description:
Efficiently implementing two complementary methodologies for discovering motifs in functional data: ProbKMA and FunBIalign. Cremona and Chiaromonte (2023) "Probabilistic K-means with Local Alignment for Clustering and Motif Discovery in Functional Data" <doi:10.1080/10618600.2022.2156522> is a probabilistic K-means algorithm that leverages local alignment and fuzzy clustering to identify recurring patterns (candidate functional motifs) across and within curves, allowing different portions of the same curve to belong to different clusters. It includes a family of distances and a normalization to discover various motif types and learns motif lengths in a data-driven manner. It can also be used for local clustering of misaligned data. Di Iorio, Cremona, and Chiaromonte (2023) "funBIalign: A Hierarchical Algorithm for Functional Motif Discovery Based on Mean Squared Residue Scores" <doi:10.48550/arXiv.2306.04254> applies hierarchical agglomerative clustering with a functional generalization of the Mean Squared Residue Score to identify motifs of a specified length in curves. This deterministic method includes a small set of user-tunable parameters. Both algorithms are suitable for single curves or sets of curves. The package also includes a flexible function to simulate functional data with embedded motifs, allowing users to generate benchmark datasets for validating and comparing motif discovery methods.
How to cite:
Jacopo Di Iorio (2025). funMoDisco: Motif Discovery in Functional Data. R package version 1.1.0, https://cran.r-project.org/web/packages/funMoDisco. Accessed 16 Jul. 2026.
Previous versions and publish date:
(2026-07-09 07:40), 1.0.0 (2025-04-15 22:10), 1.1.0 (2025-11-07 16:50)
Other packages that cited funMoDisco R package
View funMoDisco citation profile
Other R packages that funMoDisco depends, imports, suggests or enhances
Complete documentation for funMoDisco
Functions, R codes and Examples using the funMoDisco R package
Full funMoDisco package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

wordnet  
WordNet Interface
An interface to WordNet using the Jawbone Java API to WordNet. WordNet (< ...
Download / Learn more Package Citations See dependency  
Rnmr1D  
Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra
Perform the complete processing of a set of proton nuclear magnetic resonance spectra from the free ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
schoolmath  
Functions and Datasets for Math Used in School
Contains functions and datasets for math taught in school. A main focus is set to prime-calculation. ...
Download / Learn more Package Citations See dependency  
bbdetection  
Identification of Bull and Bear States of the Market
Implements two algorithms of detecting Bull and Bear markets in stock prices: the algorithm of Pagan ...
Download / Learn more Package Citations See dependency  
stevedata  
Steve's Toy Data for Teaching About a Variety of Methodological, Social, and Political Topics
This is a collection of various kinds of data with broad uses for teaching. My students, and academ ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA