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fst4pg  

Genetic Distance Segmentation for Population Genetics
View on CRAN: Click here


Download and install fst4pg package within the R console
Install from CRAN:
install.packages("fst4pg")

Install from Github:
library("remotes")
install_github("cran/fst4pg")

Install by package version:
library("remotes")
install_version("fst4pg", "1.0.0")



Attach the package and use:
library("fst4pg")
Maintained by
Tristan Mary-Huard
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-07-03
Latest Update: 2022-07-03
Description:
Provides efficient methods to compute local and genome wide genetic distances (corresponding to the so called Hudson Fst parameters) through moment method, perform chromosome segmentation into homogeneous Fst genomic regions, and selection sweep detection for multi-population comparison. When multiple profile segmentation is required, the procedure can be parallelized using the future package.
How to cite:
Tristan Mary-Huard (2022). fst4pg: Genetic Distance Segmentation for Population Genetics. R package version 1.0.0, https://cran.r-project.org/web/packages/fst4pg. Accessed 22 Dec. 2024.
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