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freesurfer
View on CRAN: Click
here
Download and install freesurfer package within the R console
Install from CRAN:
install.packages("freesurfer")
Install from Github:
library("remotes")
install_github("cran/freesurfer") Install by package version:
library("remotes")
install_version("freesurfer", "1.8.1") Attach the package and use:
library("freesurfer")
Maintained by
John Muschelli
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[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-09-07
Latest Update: 2025-05-12
Description:
Wrapper functions that interface with 'Freesurfer' <https://surfer.nmr.mgh.harvard.edu/>, a powerful and commonly-used 'neuroimaging' software, using system commands. The goal is to be able to interface with 'Freesurfer' completely in R, where you pass R objects of class 'nifti', implemented by package 'oro.nifti', and the function executes an 'Freesurfer' command and returns an R object of class 'nifti' or necessary output.
How to cite:
John Muschelli (2016). freesurfer: Wrapper Functions for 'Freesurfer'. R package version 1.8.1, https://cran.r-project.org/web/packages/freesurfer. Accessed 09 Mar. 2026.
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